RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 CD44P16070 742 aaKnown RBP11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 MPLP40238 635 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 KIR2DL1P43626 348 aaPredicted RBP11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 TKTL1P51854 596 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 YWHAEP62258 255 aaKnown RBP11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 GOLGA7BQ2TAP0 167 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 SGO2Q562F6 1265 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 ARHGAP17Q68EM7 881 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 GRAMD4Q6IC98 578 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 CCDC186Q7Z3E2 898 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 ETFBKMTQ8IXQ9 262 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 ZNF513Q8N8E2 541 aaPredicted RBP11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 MDGA1Q8NFP4 955 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 HMGB4Q8WW32 186 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 RLN3Q8WXF3 142 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 NDRG1Q92597 394 aaKnown RBP11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 SLC35C1Q96A29 364 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 UBXN6Q9BZV1 441 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 METTL14Q9HCE5 456 aaKnown RBP11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 PLK2Q9NYY3 685 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 CLIC5Q9NZA1 410 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 HESX1Q9UBX0 185 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 COQ4Q9Y3A0 265 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 USP3Q9Y6I4 520 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 TCRBV21S2A2A0A5A6 115 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 SLC12A8A0AV02 714 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 PPP1R3GB7ZBB8 358 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 TULP2O00295 520 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 SLC30A4O14863 429 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 ADAM23O75077 832 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 STC2O76061 302 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 CAVIN2O95810 425 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 ZBED1O96006 694 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 KLKB1P03952 638 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 FMO5P49326 533 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 DHPSP49366 369 aaPredicted RBP11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 STX17P56962 302 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 YWHAGP61981 247 aaKnown RBP eCLIP11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 COG7P83436 770 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 PDE4CQ08493 712 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 HSF5Q4G112 596 aaPredicted RBP11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 IL31Q6EBC2 164 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 SDE2Q6IQ49 451 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 KLHDC10Q6PID8 442 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 RASSF3Q86WH2 238 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 CREBRFQ8IUR6 639 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 ZC3H3Q8IXZ2 948 aaKnown RBP11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 ARHGAP18Q8N392 663 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 PHTF2Q8N3S3 785 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 FRMD1Q8N878 549 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 NELFBQ8WX92 580 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 CNOT6LQ96LI5 555 aaKnown RBP11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 IPO9Q96P70 1041 aaKnown RBP11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 CDK5RAP1Q96SZ6 601 aaKnown RBP11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 LRRC4Q9HBW1 653 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 VPS45Q9NRW7 570 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 RXFP3Q9NSD7 469 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 MARCH2Q9P0N8 246 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 TSPAN16Q9UKR8 245 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 PCDHB4Q9Y5E5 795 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 PCDHGA5Q9Y5G8 931 aa11.17□□□□□ -0.62
TGFBR3-205ENST00000468996 MYOFQ9NZM1 2061 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 MYH10P35580 1976 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 VDRP11473 427 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 LCP1P13796 627 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 BCKDHBP21953 392 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 TBXAS1P24557 533 aaPredicted RBP11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 PPP1R2P41236 205 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 DGKGP49619 791 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 CETN1Q12798 172 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 TCEAL6Q6IPX3 200 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 TMEM270Q6UE05 265 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 TOGARAM2Q6ZUX3 1019 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 TRMT11Q7Z4G4 463 aaKnown RBP11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 C11orf74Q86VG3 221 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 DENND1CQ8IV53 801 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 ELOA2Q8IYF1 753 aaPredicted RBP11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 CHPFQ8IZ52 775 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 PPM1KQ8N3J5 372 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 ZNF276Q8N554 614 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 TERB1Q8NA31 727 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 KCNV2Q8TDN2 545 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 TCEAL3Q969E4 200 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 CEP63Q96MT8 703 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 NT5C1BQ96P26 610 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 ACOX2Q99424 681 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 DUSP9Q99956 384 aaKnown RBP11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 ULBP1Q9BZM6 244 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 DCLK3Q9C098 648 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 FAM124BQ9H5Z6 455 aaPredicted RBP11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 KIAA1257Q9ULG3 409 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 STRIP2Q9ULQ0 834 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 CTNND2Q9UQB3 1225 aa11.16□□□□□ -0.62
TGFBR3-205ENST00000468996 CACNA1AO00555 2505 aa11.15□□□□□ -0.62
TGFBR3-205ENST00000468996 HELZP42694 1942 aaKnown RBP11.15□□□□□ -0.62
TGFBR3-205ENST00000468996 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.15□□□□□ -0.62
TGFBR3-205ENST00000468996 BICDL2A1A5D9 508 aa11.15□□□□□ -0.62
TGFBR3-205ENST00000468996 BCLAF3A2AJT9 711 aaKnown RBP11.15□□□□□ -0.62
TGFBR3-205ENST00000468996 PRRT4C9JH25 899 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms