RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 ASB3Q9Y575 518 aa18.27■□□□□ 0.52
RPL39-202ENST00000468844 DYNC1I1O14576 645 aa18.27■□□□□ 0.51
RPL39-202ENST00000468844 DDX3YO15523 660 aaKnown RBP18.27■□□□□ 0.51
RPL39-202ENST00000468844 MIPP30301 263 aa18.27■□□□□ 0.51
RPL39-202ENST00000468844 AMPD2Q01433 879 aa18.27■□□□□ 0.51
RPL39-202ENST00000468844 KCNC3Q14003 757 aa18.27■□□□□ 0.51
RPL39-202ENST00000468844 RPS6KA1Q15418 735 aa18.27■□□□□ 0.51
RPL39-202ENST00000468844 TXNRD3NBQ6F5E7 133 aa18.27■□□□□ 0.51
RPL39-202ENST00000468844 RTL10Q7L3V2 364 aa18.27■□□□□ 0.51
RPL39-202ENST00000468844 STRADAQ7RTN6 431 aa18.27■□□□□ 0.51
RPL39-202ENST00000468844 ARHGAP18Q8N392 663 aa18.27■□□□□ 0.51
RPL39-202ENST00000468844 DQX1Q8TE96 717 aaKnown RBP18.27■□□□□ 0.51
RPL39-202ENST00000468844 OVCA2Q8WZ82 227 aa18.27■□□□□ 0.51
RPL39-202ENST00000468844 ALG3Q92685 438 aa18.27■□□□□ 0.51
RPL39-202ENST00000468844 DOCK8Q8NF50 2099 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 MIF4GDA9UHW6 222 aaKnown RBP18.26■□□□□ 0.51
RPL39-202ENST00000468844 M0QYT0 321 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 CCL16O15467 120 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 ENDOD1O94919 500 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 IL1R2P27930 398 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 PCK1P35558 622 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 PEX5P50542 639 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 SNX30Q5VWJ9 437 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 TMEM150AQ86TG1 271 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 TMC8Q8IU68 726 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 PDZD8Q8NEN9 1154 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 VN1R2Q8NFZ6 395 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 HDAC7Q8WUI4 952 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 ZNF512Q96ME7 567 aaPredicted RBP18.26■□□□□ 0.51
RPL39-202ENST00000468844 PEBP4Q96S96 227 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 LRRC3Q9BY71 257 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 IL21Q9HBE4 155 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 PIGVQ9NUD9 493 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 RRN3Q9NYV6 651 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 SNX12Q9UMY4 172 aa18.26■□□□□ 0.51
RPL39-202ENST00000468844 SYNJ2BP-COX16A0A087WUM0 186 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 CCDC66A2RUB6 948 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 ZNF840PA6NDX5 716 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 TRUB2O95900 331 aaKnown RBP18.25■□□□□ 0.51
RPL39-202ENST00000468844 IGLV3-25P01717 112 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 RARGP13631 454 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 HOXA9P31269 272 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 CXCR5P32302 372 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 SSR1P43307 286 aaKnown RBP18.25■□□□□ 0.51
RPL39-202ENST00000468844 DCAF12L1Q5VU92 463 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 CYP4V2Q6ZWL3 525 aaPredicted RBP18.25■□□□□ 0.51
RPL39-202ENST00000468844 TAC4Q86UU9 113 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 CASP10Q92851 521 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 PGAP3Q96FM1 320 aaPredicted RBP18.25■□□□□ 0.51
RPL39-202ENST00000468844 PRDM12Q9H4Q4 367 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 CCSER2Q9H7U1 834 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 COX16Q9P0S2 106 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 UXTQ9UBK9 157 aaPredicted RBP18.25■□□□□ 0.51
RPL39-202ENST00000468844 PCSK1NQ9UHG2 260 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 USP18Q9UMW8 372 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 PCDHA3Q9Y5H8 950 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 NUP205Q92621 2012 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 PSTPIP1O43586 416 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 DESP17661 470 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 CTNNA2P26232 953 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 NME3Q13232 169 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 EIF4EBP2Q13542 120 aaPredicted RBP18.25■□□□□ 0.51
RPL39-202ENST00000468844 ATP13A4Q4VNC1 1196 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 ZNF697Q5TEC3 545 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 RHOT1Q8IXI2 618 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 ELMOD1Q8N336 334 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 OSBPL9Q96SU4 736 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 SMOC2Q9H3U7 446 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 WDR6Q9NNW5 1121 aaKnown RBP18.25■□□□□ 0.51
RPL39-202ENST00000468844 HCFC1R1Q9NWW0 138 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 SFMBT1Q9UHJ3 866 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 DPP7Q9UHL4 492 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 SAR1BQ9Y6B6 198 aa18.25■□□□□ 0.51
RPL39-202ENST00000468844 NUP210Q8TEM1 1887 aaPredicted RBP18.25■□□□□ 0.51
RPL39-202ENST00000468844 SOX1O00570 391 aaPredicted RBP18.24■□□□□ 0.51
RPL39-202ENST00000468844 TLR5O60602 858 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 SRGAP2O75044 1071 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 TBX18O95935 607 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 F11P03951 625 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 GJC1P36383 396 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 SMTNL2Q2TAL5 461 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 KCNT1Q5JUK3 1230 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 GAREM2Q75VX8 874 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 RSRC2Q7L4I2 434 aaKnown RBP18.24■□□□□ 0.51
RPL39-202ENST00000468844 FAM131BQ86XD5 332 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 HS6ST3Q8IZP7 471 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 UBL4BQ8N7F7 174 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 MYRIPQ8NFW9 859 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 RNF139Q8WU17 664 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 CDCA3Q99618 268 aaPredicted RBP18.24■□□□□ 0.51
RPL39-202ENST00000468844 NSUN3Q9H649 340 aaKnown RBP18.24■□□□□ 0.51
RPL39-202ENST00000468844 FAM204AQ9H8W3 233 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 DDIT4Q9NX09 232 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 TRPM5Q9NZQ8 1165 aa18.24■□□□□ 0.51
RPL39-202ENST00000468844 TMEM265A0A087WTH1 108 aa18.23■□□□□ 0.51
RPL39-202ENST00000468844 KCNK3O14649 394 aa18.23■□□□□ 0.51
RPL39-202ENST00000468844 HNRNPA1P09651 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
RPL39-202ENST00000468844 RDXP35241 583 aaKnown RBP18.23■□□□□ 0.51
RPL39-202ENST00000468844 DEUP1Q05D60 604 aa18.23■□□□□ 0.51
RPL39-202ENST00000468844 GRIN2CQ14957 1233 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms