RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 KIF9Q9HAQ2 790 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 TRPV5Q9NQA5 729 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 TLR8Q9NR97 1041 aaKnown RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 FAM49BQ9NUQ9 324 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 TMEM30AQ9NV96 361 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 ASNSD1Q9NWL6 643 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 CUEDC1Q9NWM3 386 aaPredicted RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 AIPL1Q9NZN9 384 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 TRPM5Q9NZQ8 1165 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 NOCTQ9UK39 431 aaKnown RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 TSPAN16Q9UKR8 245 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 ARHGAP26Q9UNA1 814 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 SCML2Q9UQR0 700 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 MRPS23Q9Y3D9 190 aaKnown RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 FHOD1Q9Y613 1164 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 COL4A3Q01955 1670 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 MUC6Q6W4X9 2439 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 DOCK4Q8N1I0 1966 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 USP34Q70CQ2 3546 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 A0A1W2PRU2 124 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 M0QYV0 167 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CLDN5O00501 218 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 EPHB6O15197 1021 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CYP26A1O43174 497 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 TEX33O43247 280 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 MOSPD3O75425 235 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 TADA3O75528 432 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 SOAT2O75908 522 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 BEST1O76090 585 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CSPG5O95196 566 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 ZBED1O96006 694 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 OAS1P00973 400 aaKnown RBP3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CYP1A1P04798 512 aaPredicted RBP3.7□□□□□ -1.82
TRIM59-202ENST00000468542 TPM1P09493 284 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 GZMAP12544 262 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 KRT5P13647 590 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 ALADP13716 330 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 GLULP15104 373 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 IL9P15248 144 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CD19P15391 556 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 MMP8P22894 467 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 GABRR2P28476 465 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 KRT9P35527 623 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 AVPR1AP37288 418 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CCR2P41597 374 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 GABRB2P47870 512 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 KPNA1P52294 538 aaPredicted RBP3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CACNA2D1P54289 1103 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 MAP3K7CLP57077 242 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 SLC7A9P82251 487 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CDK17Q00537 523 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CDR2Q01850 454 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CENPCQ03188 943 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 PDE4CQ08493 712 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 TAF10Q12962 218 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 PDCLQ13371 301 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 MTMR3Q13615 1198 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 HTR4Q13639 388 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 RAPGEF1Q13905 1077 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 NR6A1Q15406 480 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CCDC142Q17RM4 750 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 GOLGA7BQ2TAP0 167 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 ZNF394Q53GI3 561 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 ACBD5Q5T8D3 534 aaPredicted RBP3.7□□□□□ -1.82
TRIM59-202ENST00000468542 GJB7Q6PEY0 223 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 TOGARAM2Q6ZUX3 1019 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 SLC26A9Q7LBE3 791 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CACNA2D4Q7Z3S7 1137 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 SLC47A2Q86VL8 602 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CNGA4Q8IV77 575 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 VSTM4Q8IW00 320 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 SCN4BQ8IWT1 228 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 UBALD2Q8IYN6 164 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CMTM8Q8IZV2 173 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 SIX6OS1Q8N1H7 587 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 CELF5Q8N6W0 485 aaKnown RBP3.7□□□□□ -1.82
TRIM59-202ENST00000468542 C12orf76Q8N812 135 aaPredicted RBP3.7□□□□□ -1.82
TRIM59-202ENST00000468542 TMEM35BQ8NCS4 154 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 MSANTD4Q8NCY6 345 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 SHKBP1Q8TBC3 707 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 ADAMTS19Q8TE59 1207 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 IPO4Q8TEX9 1081 aaKnown RBP3.7□□□□□ -1.82
TRIM59-202ENST00000468542 TSC1Q92574 1164 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 DNASE1L2Q92874 299 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 SECISBP2LQ93073 1101 aaKnown RBP3.7□□□□□ -1.82
TRIM59-202ENST00000468542 ELSPBP1Q96BH3 223 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 OTUB2Q96DC9 234 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 MSANTD3Q96H12 275 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 VCPIP1Q96JH7 1222 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 NAP1L5Q96NT1 182 aaPredicted RBP3.7□□□□□ -1.82
TRIM59-202ENST00000468542 KCNK16Q96T55 309 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 INSM2Q96T92 566 aaPredicted RBP3.7□□□□□ -1.82
TRIM59-202ENST00000468542 LPIN3Q9BQK8 851 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 SYT11Q9BT88 431 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 MED10Q9BTT4 135 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 ZNF395Q9H8N7 513 aaPredicted RBP3.7□□□□□ -1.82
TRIM59-202ENST00000468542 LRRC4Q9HBW1 653 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 ZFP14Q9HCL3 533 aa3.7□□□□□ -1.82
TRIM59-202ENST00000468542 ZNF334Q9HCZ1 680 aaPredicted RBP3.7□□□□□ -1.82
TRIM59-202ENST00000468542 PRDM6Q9NQX0 595 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms