RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 UBE2TQ9NPD8 197 aaPredicted RBP17.94■□□□□ 0.46
SSBP1-207ENST00000468267 ARHGEF4Q9NR80 690 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 NCDNQ9UBB6 729 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 RAB23Q9ULC3 237 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.94■□□□□ 0.46
SSBP1-207ENST00000468267 ANTXRLA6NF34 631 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 CALCAP01258 141 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 BRD2P25440 801 aaKnown RBP17.93■□□□□ 0.46
SSBP1-207ENST00000468267 TNFRSF4P43489 277 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 PXNP49023 591 aaPredicted RBP17.93■□□□□ 0.46
SSBP1-207ENST00000468267 MRPS21P82921 87 aaKnown RBP17.93■□□□□ 0.46
SSBP1-207ENST00000468267 ADIGQ0VDE8 80 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 EFEMP1Q12805 493 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 SRSF5Q13243 272 aaKnown RBP17.93■□□□□ 0.46
SSBP1-207ENST00000468267 SIM2Q14190 667 aaPredicted RBP17.93■□□□□ 0.46
SSBP1-207ENST00000468267 DMC1Q14565 340 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 ANO4Q32M45 955 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 C2orf27AQ580R0 203 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 SCML4Q8N228 414 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 NAT16Q8N8M0 369 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 SECISBP2LQ93073 1101 aaKnown RBP17.93■□□□□ 0.46
SSBP1-207ENST00000468267 IPO9Q96P70 1041 aaKnown RBP17.93■□□□□ 0.46
SSBP1-207ENST00000468267 CRACR2AQ9BSW2 395 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 THAP9Q9H5L6 903 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 WDR35Q9P2L0 1181 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 DEC1Q9P2X7 70 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 RASAL2Q9UJF2 1139 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 ZNF510Q9Y2H8 683 aa17.93■□□□□ 0.46
SSBP1-207ENST00000468267 TULP3O75386 442 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 GABBR2O75899 941 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 KLKB1P03952 638 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 CHRM1P11229 460 aaPredicted RBP17.92■□□□□ 0.46
SSBP1-207ENST00000468267 KDSRQ06136 332 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 TPD52L1Q16890 204 aaPredicted RBP17.92■□□□□ 0.46
SSBP1-207ENST00000468267 DPCR1Q3MIW9 517 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 PREPLQ4J6C6 727 aaPredicted RBP17.92■□□□□ 0.46
SSBP1-207ENST00000468267 LAIR1Q6GTX8 287 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 PMF1Q6P1K2 205 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 GBP6Q6ZN66 633 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 PRR23BQ6ZRT6 265 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 RSRC2Q7L4I2 434 aaKnown RBP17.92■□□□□ 0.46
SSBP1-207ENST00000468267 KIAA2013Q8IYS2 634 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 SIX6OS1Q8N1H7 587 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 HHIPQ96QV1 700 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 DCLK3Q9C098 648 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 CNGB3Q9NQW8 809 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 MARK1Q9P0L2 795 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 MARCH2Q9P0N8 246 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 STRIP2Q9ULQ0 834 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 MMP17Q9ULZ9 603 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 LAMA1P25391 3075 aa17.92■□□□□ 0.46
SSBP1-207ENST00000468267 GTPBP10A4D1E9 387 aaKnown RBP17.91■□□□□ 0.46
SSBP1-207ENST00000468267 YJEFN3A6XGL0 299 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 E7ENQ6 273 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 M0QYV0 167 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 APBB3O95704 486 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 HMBSP08397 361 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 KRT5P13647 590 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 LCP1P13796 627 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 SLC9A1P19634 815 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 ERCC5P28715 1186 aaPredicted RBP17.91■□□□□ 0.46
SSBP1-207ENST00000468267 MTIF2P46199 727 aaKnown RBP17.91■□□□□ 0.46
SSBP1-207ENST00000468267 RGS7P49802 495 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 LPAL2Q16609 132 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 BSPRYQ5W0U4 402 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 TRIM65Q6PJ69 517 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 ENOSF1Q7L5Y1 443 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 PIP4P2Q8N4L2 257 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 GAB3Q8WWW8 586 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 FAM81BQ96LP2 452 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 BBS2Q9BXC9 721 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 OLA1Q9NTK5 396 aaKnown RBP17.91■□□□□ 0.46
SSBP1-207ENST00000468267 EBF1Q9UH73 591 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 DACH1Q9UI36 760 aa17.91■□□□□ 0.46
SSBP1-207ENST00000468267 DNAH14Q0VDD8 3507 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 TBC1D3BA6NDS4 549 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 NEDD8-MDP1E9PL57 170 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 AXIN1O15169 862 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 CACNG3O60359 315 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 TYRP14679 529 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 KIR2DL1P43626 348 aaPredicted RBP17.9■□□□□ 0.46
SSBP1-207ENST00000468267 MFAP3P55082 362 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 DAOAP59103 153 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 EXOC3L4Q17RC7 722 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 HSF5Q4G112 596 aaPredicted RBP17.9■□□□□ 0.46
SSBP1-207ENST00000468267 EMC10Q5UCC4 262 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 TPGS1Q6ZTW0 290 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 CEP68Q76N32 757 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 FAM114A1Q8IWE2 563 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 CCDC33Q8N5R6 958 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 IL17RCQ8NAC3 791 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 HSFY1Q96LI6 401 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 GBP4Q96PP9 640 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 XPO6Q96QU8 1125 aaKnown RBP17.9■□□□□ 0.46
SSBP1-207ENST00000468267 ABCC13Q9NSE7 274 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 GMEB2Q9UKD1 530 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 ABCA7Q8IZY2 2146 aa17.9■□□□□ 0.46
SSBP1-207ENST00000468267 CACNA1AO00555 2505 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 SLC12A8A0AV02 714 aa17.89■□□□□ 0.45
SSBP1-207ENST00000468267 TRIM24O15164 1050 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms