RNA–Protein interactions for RNA: ENST00000468166.5

SND1-206, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-206ENST00000468166 SSX2IPQ9Y2D8 614 aa8.32□□□□□ -1.08
SND1-206ENST00000468166 NR2E1Q9Y466 385 aa8.32□□□□□ -1.08
SND1-206ENST00000468166 C3orf70A6NLC5 250 aaPredicted RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 ERLIN1O75477 346 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 ENDOD1O94919 500 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 F9P00740 461 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 CD48P09326 243 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 H2AFXP16104 143 aaPredicted RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 YWHAQP27348 245 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 GBP1P32455 592 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 CA8P35219 290 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 CTNNB1P35222 781 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 TUFMP49411 452 aaKnown RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 ATXN1P54253 815 aaKnown RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 AIF1P55008 147 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 VSNL1P62760 191 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 DYNLT1P63172 113 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 PITX1P78337 314 aaPredicted RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 SLC7A5Q01650 507 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 DPYSL3Q14195 570 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 BRD3Q15059 726 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 TAZQ16635 292 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 ZC3H12AQ5D1E8 599 aaKnown RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 PPP6R3Q5H9R7 873 aaPredicted RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 EFHC2Q5JST6 749 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 ERMARDQ5T6L9 678 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 TPGS2Q68CL5 300 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 WDR93Q6P2C0 686 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 FBXO38Q6PIJ6 1188 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 CCDC137Q6PK04 289 aaKnown RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 BNIPLQ7Z465 357 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 ANKS1BQ7Z6G8 1248 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 TAC4Q86UU9 113 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 FAM131BQ86XD5 332 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 RFX6Q8HWS3 928 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 PSTKQ8IV42 348 aaKnown RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 IFT20Q8IY31 132 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 CCDC105Q8IYK2 499 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 ZDHHC14Q8IZN3 488 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 CCDC185Q8N715 623 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 ZNF461Q8TAF7 563 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 ADAM32Q8TC27 787 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 SP7Q8TDD2 431 aaPredicted RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 GPR152Q8TDT2 470 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 RNF139Q8WU17 664 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 HDAC7Q8WUI4 952 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 C1orf54Q8WWF1 131 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 CLP1Q92989 425 aaKnown RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 FBXO32Q969P5 355 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 CEP295NLQ96MC4 621 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 CLSTN3Q9BQT9 956 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 MAK16Q9BXY0 300 aaKnown RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 DCLK3Q9C098 648 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 RAB17Q9H0T7 212 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 ZBP1Q9H171 429 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 CRISPLD1Q9H336 500 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 SMOC2Q9H3U7 446 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 DHX35Q9H5Z1 703 aaKnown RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 LRRC19Q9H756 370 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 PCDH18Q9HCL0 1135 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.31□□□□□ -1.08
SND1-206ENST00000468166 ABCC13Q9NSE7 274 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 PIGVQ9NUD9 493 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 GPATCH2LQ9NWQ4 482 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 COMMD8Q9NX08 183 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 GMIPQ9P107 970 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 CALCOCO1Q9P1Z2 691 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 HSFX1Q9UBD0 423 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 AFF4Q9UHB7 1163 aaKnown RBP8.31□□□□□ -1.08
SND1-206ENST00000468166 AMACRQ9UHK6 382 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 RASAL2Q9UJF2 1139 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 RAB21Q9UL25 225 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 AP4E1Q9UPM8 1137 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 EFR3BQ9Y2G0 817 aa8.31□□□□□ -1.08
SND1-206ENST00000468166 A0A1W2PQH9 124 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 LCHNA4D1U4 455 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 CCDC151A5D8V7 595 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 FAM187AA6NFU0 413 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 SLC38A8A6NNN8 435 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 ZNF487B1APH4 448 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 PRRG1O14668 218 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 TTI1O43156 1089 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 CST8O60676 142 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 ZMYND10O75800 440 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 ABLIM3O94929 683 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 LINC00271P0C7V0 271 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 CTSAP10619 480 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 ATF6P18850 670 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 COILP38432 576 aaPredicted RBP8.3□□□□□ -1.08
SND1-206ENST00000468166 PSEN1P49768 467 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 ARSEP51690 589 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 USP46P62068 366 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 GUCY2DQ02846 1103 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 SNX1Q13596 522 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 RAB33AQ14088 237 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 TFDP2Q14188 446 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 DPYSL2Q16555 572 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 CA9Q16790 459 aa8.3□□□□□ -1.08
SND1-206ENST00000468166 ARL13BQ3SXY8 428 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms