RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-216	ENST00000467134	C5orf67	F2Z3F1	127 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134		M0QYT0	321 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	NDC80	O14777	642 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	FGF18	O76093	207 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	RB1	P06400	928 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	ZDHHC11B	P0C7U3	371 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	ATP2A2	P16615	1042 aa	Known RBP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	ZFX	P17010	805 aa	Predicted RBP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	YWHAQ	P27348	245 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	COIL	P38432	576 aa	Predicted RBP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	HCAR3	P49019	387 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	DEUP1	Q05D60	604 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	PLD1	Q13393	1074 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	DPYSL3	Q14195	570 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	PPP2R5D	Q14738	602 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	NAA30	Q147X3	362 aa	Predicted RBP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	MAP9	Q49MG5	647 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	SNX30	Q5VWJ9	437 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	AADACL2	Q6P093	401 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.46	□□□□□ -0.57	2e-6	■□□□□ 8.2
MUC1-216	ENST00000467134	TCEAL8	Q8IYN2	117 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	ZDHHC14	Q8IZN3	488 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	ATAD1	Q8NBU5	361 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	KCTD6	Q8NC69	237 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	SLC35B2	Q8TB61	432 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	DQX1	Q8TE96	717 aa	Known RBP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	MAGOHB	Q96A72	148 aa	Known RBP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	TRMT2B	Q96GJ1	504 aa	Known RBP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	MYRFL	Q96LU7	910 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	ZBED2	Q9BTP6	218 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	LRRC1	Q9BTT6	524 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	DCLK3	Q9C098	648 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	DDX47	Q9H0S4	455 aa	Known RBP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	ZWILCH	Q9H900	591 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	PCDH18	Q9HCL0	1135 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	GDF3	Q9NR23	364 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	FBXW11	Q9UKB1	542 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	FZD10	Q9ULW2	581 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	AP4E1	Q9UPM8	1137 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	DRG1	Q9Y295	367 aa	Known RBP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	NR2E1	Q9Y466	385 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134		V9GYY5	206 aa	Predicted RBP	11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	BRCA2	P51587	3418 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	APOC4-APOC2	K7ER74	178 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	RAD51C	O43502	376 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	GAS8	O95995	478 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	APOC2	P02655	101 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	RHOXF2B	P0C7M4	288 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	SLC2A3	P11169	496 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	NCAM1	P13591	858 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	TGM2	P21980	687 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	L1CAM	P32004	1257 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	OR1D2	P34982	312 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	GJC1	P36383	396 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	PPP3CC	P48454	512 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	KPNA1	P52294	538 aa	Predicted RBP	11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	CDH6	P55285	790 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	DR1	Q01658	176 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	NRG1	Q02297	640 aa	Predicted RBP	11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	CDO1	Q16878	200 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	ARL13B	Q3SXY8	428 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	ATP13A4	Q4VNC1	1196 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	EFHC2	Q5JST6	749 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	ZFYVE27	Q5T4F4	411 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	SH3PXD2A	Q5TCZ1	1133 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	SYPL2	Q5VXT5	272 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	BTBD8	Q5XKL5	378 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	SLC9A4	Q6AI14	798 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	FAM117B	Q6P1L5	589 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	KLHDC10	Q6PID8	442 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	HFE2	Q6ZVN8	426 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	SCD5	Q86SK9	330 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	VPS52	Q8N1B4	723 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	SCAMP5	Q8TAC9	235 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	CCHCR1	Q8TD31	782 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	RNF25	Q96BH1	459 aa	Predicted RBP	11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	B3GALT6	Q96L58	329 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	SERPINB11	Q96P15	392 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	RNF157	Q96PX1	679 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	PNKP	Q96T60	521 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	RHOXF2	Q9BQY4	288 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	ADAM33	Q9BZ11	813 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	UBE2O	Q9C0C9	1292 aa	Known RBP	11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	WDR6	Q9NNW5	1121 aa	Known RBP	11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	TLR8	Q9NR97	1041 aa	Known RBP	11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	PCSK1N	Q9UHG2	260 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	NAALADL1	Q9UQQ1	740 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	ASB3	Q9Y575	518 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	RAD54B	Q9Y620	910 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	ANAPC1	Q9H1A4	1944 aa		11.45	□□□□□ -0.58
MUC1-216	ENST00000467134	TCRBV7S2A1N4T	A0A589	114 aa		11.44	□□□□□ -0.58
MUC1-216	ENST00000467134	SLC38A8	A6NNN8	435 aa		11.44	□□□□□ -0.58
MUC1-216	ENST00000467134		H3BRJ5	948 aa		11.44	□□□□□ -0.58
MUC1-216	ENST00000467134	ADAM12	O43184	909 aa		11.44	□□□□□ -0.58
MUC1-216	ENST00000467134	IRAK2	O43187	625 aa		11.44	□□□□□ -0.58
MUC1-216	ENST00000467134	ATP8B1	O43520	1251 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms