RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 TWNKQ96RR1 684 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 SENP7Q9BQF6 1050 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 VN1R3Q9BXE9 311 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 C1QTNF3Q9BXJ4 246 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 INO80BQ9C086 356 aaPredicted RBP4.67□□□□□ -1.66
VPS13A-209ENST00000467124 KLC2Q9H0B6 622 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 WASH6PQ9NQA3 447 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 INTS13Q9NVM9 706 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 ANKFY1Q9P2R3 1169 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 CCNL1Q9UK58 526 aaPredicted RBP4.67□□□□□ -1.66
VPS13A-209ENST00000467124 ASAP1Q9ULH1 1129 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 VPS4AQ9UN37 437 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 HOXC11O43248 304 aaPredicted RBP4.66□□□□□ -1.66
VPS13A-209ENST00000467124 CBFA2T3O75081 653 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 CDKL5O76039 1030 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 SPDEFO95238 335 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 TMEM225BP0DP42 221 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 ELF1P32519 619 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 PDE1AP54750 535 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 EIF4A1P60842 406 aaKnown RBP4.66□□□□□ -1.66
VPS13A-209ENST00000467124 SLC25A3Q00325 362 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 PLP2Q04941 152 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 BEAN1Q3B7T3 259 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 SLC9C2Q5TAH2 1124 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 FAAH2Q6GMR7 532 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 C1orf122Q6ZSJ8 110 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 GPR149Q86SP6 731 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 LINS1Q8NG48 757 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 UCMAQ8WVF2 138 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 CPT1BQ92523 772 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 DVL3Q92997 716 aaPredicted RBP4.66□□□□□ -1.66
VPS13A-209ENST00000467124 WDYHV1Q96HA8 205 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 RBM17Q96I25 401 aaKnown RBP4.66□□□□□ -1.66
VPS13A-209ENST00000467124 WDR24Q96S15 920 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 GPR63Q9BZJ6 419 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 PLEKHA2Q9HB19 425 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 IRAK4Q9NWZ3 460 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 SMPD4Q9NXE4 827 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 TESQ9UGI8 421 aaKnown RBP4.66□□□□□ -1.66
VPS13A-209ENST00000467124 TRPC5Q9UL62 973 aaPredicted RBP4.66□□□□□ -1.66
VPS13A-209ENST00000467124 RCE1Q9Y256 329 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 DNAJC16Q9Y2G8 782 aa4.66□□□□□ -1.66
VPS13A-209ENST00000467124 VWC2LB2RUY7 222 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 AP4M1O00189 453 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 KLK10O43240 276 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 DDIT3P35638 169 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 ATXN1P54253 815 aaKnown RBP4.65□□□□□ -1.67
VPS13A-209ENST00000467124 DEUP1Q05D60 604 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 ZNF484Q5JVG2 852 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 ZNF569Q5MCW4 686 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 GPATCH4Q5T3I0 446 aaKnown RBP4.65□□□□□ -1.67
VPS13A-209ENST00000467124 TEDDM1Q5T9Z0 273 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 CCDC30Q5VVM6 783 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 CCDC144NLQ6NUI1 221 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 TRABD2AQ86V40 505 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 TCP11L2Q8N4U5 519 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 ZNF276Q8N554 614 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 PCYOX1LQ8NBM8 494 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 EXTL1Q92935 676 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 ZUFSPQ96AP4 578 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 FKBP10Q96AY3 582 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 MYEOVQ96EZ4 313 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 ZDHHC12Q96GR4 267 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 REXO5Q96IC2 774 aaKnown RBP4.65□□□□□ -1.67
VPS13A-209ENST00000467124 BARD1Q99728 777 aaKnown RBP4.65□□□□□ -1.67
VPS13A-209ENST00000467124 HERC2P3Q9BVR0 1158 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 KRTAP9-8Q9BYQ0 159 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 ARHGAP39Q9C0H5 1083 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 G6PC2Q9NQR9 355 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 TMEM160Q9NX00 188 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 NDUFAF4Q9P032 175 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 STEAP1Q9UHE8 339 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 DERAQ9Y315 318 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 TSC22D4Q9Y3Q8 395 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 PCDHA10Q9Y5I2 948 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 COL15A1P39059 1388 aa4.65□□□□□ -1.67
VPS13A-209ENST00000467124 FAM90A20PA6NIJ5 464 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 SLC38A8A6NNN8 435 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 EFCAB8A8MWE9 144 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 CTIFO43310 598 aaKnown RBP4.64□□□□□ -1.67
VPS13A-209ENST00000467124 HEXIM1O94992 359 aaKnown RBP4.64□□□□□ -1.67
VPS13A-209ENST00000467124 LDHCP07864 332 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 ITGAMP11215 1152 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 LAG3P18627 525 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 CXCR5P32302 372 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 MCM5P33992 734 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 ADAM17P78536 824 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 BLOC1S1P78537 153 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 E2F1Q01094 437 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 CHRNDQ07001 517 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 SEMA3BQ13214 749 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 ACOX1Q15067 660 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 SMAD1Q15797 465 aaKnown RBP4.64□□□□□ -1.67
VPS13A-209ENST00000467124 TRIM60Q495X7 471 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 AASDHQ4L235 1098 aaPredicted RBP4.64□□□□□ -1.67
VPS13A-209ENST00000467124 ATG16L1Q676U5 607 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 C16orf89Q6UX73 402 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 KIAA1324Q6UXG2 1013 aaKnown RBP4.64□□□□□ -1.67
VPS13A-209ENST00000467124 TICAM2Q86XR7 235 aa4.64□□□□□ -1.67
VPS13A-209ENST00000467124 IL17DQ8TAD2 202 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms