RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PCDHGB1Q9Y5G3 927 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 SIRT4Q9Y6E7 314 aaPredicted RBP4.58□□□□□ -1.68
XRN1-206ENST00000467077 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.58□□□□□ -1.68
XRN1-206ENST00000467077 KIF26BQ2KJY2 2108 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 SPRY2O43597 315 aa4.57□□□□□ -1.68
XRN1-206ENST00000467077 COMPP49747 757 aaPredicted RBP4.57□□□□□ -1.68
XRN1-206ENST00000467077 PLS1Q14651 629 aa4.57□□□□□ -1.68
XRN1-206ENST00000467077 C12orf76Q8N812 135 aaPredicted RBP4.57□□□□□ -1.68
XRN1-206ENST00000467077 LPAR1Q92633 364 aa4.57□□□□□ -1.68
XRN1-206ENST00000467077 CTHRC1Q96CG8 243 aa4.57□□□□□ -1.68
XRN1-206ENST00000467077 SLC35A4Q96G79 324 aa4.57□□□□□ -1.68
XRN1-206ENST00000467077 VN1R3Q9BXE9 311 aa4.57□□□□□ -1.68
XRN1-206ENST00000467077 RMI1Q9H9A7 625 aa4.57□□□□□ -1.68
XRN1-206ENST00000467077 PAPOLBQ9NRJ5 636 aaKnown RBP4.57□□□□□ -1.68
XRN1-206ENST00000467077 URB2Q14146 1524 aaKnown RBP4.56□□□□□ -1.68
XRN1-206ENST00000467077 FER1L4A9Z1Z3 1794 aa4.56□□□□□ -1.68
XRN1-206ENST00000467077 WASHC2CQ9Y4E1 1318 aa4.56□□□□□ -1.68
XRN1-206ENST00000467077 FYB1O15117 783 aa4.56□□□□□ -1.68
XRN1-206ENST00000467077 THP07101 528 aa4.56□□□□□ -1.68
XRN1-206ENST00000467077 DSCR9P59020 149 aa4.56□□□□□ -1.68
XRN1-206ENST00000467077 PLA1AQ53H76 456 aa4.56□□□□□ -1.68
XRN1-206ENST00000467077 FCRL5Q96RD9 977 aa4.56□□□□□ -1.68
XRN1-206ENST00000467077 TM2D2Q9BX73 214 aa4.56□□□□□ -1.68
XRN1-206ENST00000467077 TM6SF1Q9BZW5 370 aa4.56□□□□□ -1.68
XRN1-206ENST00000467077 MYO6Q9UM54 1294 aa4.56□□□□□ -1.68
XRN1-206ENST00000467077 PCDHA6Q9UN73 950 aa4.56□□□□□ -1.68
XRN1-206ENST00000467077 TNKSO95271 1327 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 CXCR3P49682 368 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 PTPN21Q16825 1174 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 ODF3L2Q3SX64 289 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 SRGAP1Q7Z6B7 1085 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 ZCRB1Q8TBF4 217 aaKnown RBP4.55□□□□□ -1.68
XRN1-206ENST00000467077 PIGKQ92643 395 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 SEZ6LQ9BYH1 1024 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 ASPSCR1Q9BZE9 553 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 USP29Q9HBJ7 922 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 TRIM36Q9NQ86 728 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 HIF1ANQ9NWT6 349 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 MED16Q9Y2X0 877 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 EIF4G3O43432 1585 aaKnown RBP4.55□□□□□ -1.68
XRN1-206ENST00000467077 OBSCNQ5VST9 7968 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 SCN5AQ14524 2016 aa4.55□□□□□ -1.68
XRN1-206ENST00000467077 A0A1W2PPC1 479 aa4.54□□□□□ -1.68
XRN1-206ENST00000467077 H0YGN5 161 aa4.54□□□□□ -1.68
XRN1-206ENST00000467077 PKMP14618 531 aaKnown RBP4.54□□□□□ -1.68
XRN1-206ENST00000467077 CD19P15391 556 aa4.54□□□□□ -1.68
XRN1-206ENST00000467077 PTPROQ16827 1216 aa4.54□□□□□ -1.68
XRN1-206ENST00000467077 SLC4A8Q2Y0W8 1093 aa4.54□□□□□ -1.68
XRN1-206ENST00000467077 LMBRD2Q68DH5 695 aaPredicted RBP4.54□□□□□ -1.68
XRN1-206ENST00000467077 HIST2H2BCQ6DN03 193 aa4.54□□□□□ -1.68
XRN1-206ENST00000467077 RTL10Q7L3V2 364 aa4.54□□□□□ -1.68
XRN1-206ENST00000467077 SLC15A4Q8N697 577 aa4.54□□□□□ -1.68
XRN1-206ENST00000467077 LMO3Q8TAP4 145 aa4.54□□□□□ -1.68
XRN1-206ENST00000467077 DNAJB14Q8TBM8 379 aa4.54□□□□□ -1.68
XRN1-206ENST00000467077 EDC3Q96F86 508 aaKnown RBP4.54□□□□□ -1.68
XRN1-206ENST00000467077 SLC13A1Q9BZW2 595 aa4.54□□□□□ -1.68
XRN1-206ENST00000467077 BRINP2Q9C0B6 783 aa4.54□□□□□ -1.68
XRN1-206ENST00000467077 MMP24Q9Y5R2 645 aa4.54□□□□□ -1.68
XRN1-206ENST00000467077 ZNF608Q9ULD9 1512 aaPredicted RBP4.54□□□□□ -1.68
XRN1-206ENST00000467077 TRBV5-3A0A0A0MS03 114 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 SLC22A23A1A5C7 686 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 PDCP20941 246 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 RPS6KB1P23443 525 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 TXNL4AP83876 142 aaKnown RBP4.53□□□□□ -1.68
XRN1-206ENST00000467077 ODF1Q14990 250 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 MRGPRG-AS1Q2M3A8 158 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 PTCHD3Q3KNS1 767 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 DNAJC5GQ8N7S2 189 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 HES6Q96HZ4 224 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 GPATCH3Q96I76 525 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 SMAD5Q99717 465 aaKnown RBP4.53□□□□□ -1.68
XRN1-206ENST00000467077 MS4A7Q9GZW8 240 aaPredicted RBP4.53□□□□□ -1.68
XRN1-206ENST00000467077 PLK2Q9NYY3 685 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 SPEF1Q9Y4P9 236 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 CFTRP13569 1480 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 ARAP1Q96P48 1450 aa4.53□□□□□ -1.68
XRN1-206ENST00000467077 IFT140Q96RY7 1462 aa4.52□□□□□ -1.69
XRN1-206ENST00000467077 PODXLO00592 558 aa4.52□□□□□ -1.69
XRN1-206ENST00000467077 RRHO14718 337 aa4.52□□□□□ -1.69
XRN1-206ENST00000467077 SRGAP2O75044 1071 aa4.52□□□□□ -1.69
XRN1-206ENST00000467077 ART1P52961 327 aa4.52□□□□□ -1.69
XRN1-206ENST00000467077 NKX6-1P78426 367 aaPredicted RBP4.52□□□□□ -1.69
XRN1-206ENST00000467077 BRDTQ58F21 947 aaPredicted RBP4.52□□□□□ -1.69
XRN1-206ENST00000467077 NUGGCQ68CJ6 796 aa4.52□□□□□ -1.69
XRN1-206ENST00000467077 ADGRF4Q8IZF3 695 aa4.52□□□□□ -1.69
XRN1-206ENST00000467077 CELF5Q8N6W0 485 aaKnown RBP4.52□□□□□ -1.69
XRN1-206ENST00000467077 PNPLA1Q8N8W4 532 aa4.52□□□□□ -1.69
XRN1-206ENST00000467077 RAPGEF4Q8WZA2 1011 aa4.52□□□□□ -1.69
XRN1-206ENST00000467077 PHF21BQ96EK2 531 aa4.52□□□□□ -1.69
XRN1-206ENST00000467077 WDYHV1Q96HA8 205 aa4.52□□□□□ -1.69
XRN1-206ENST00000467077 HOMER2Q9NSB8 354 aa4.52□□□□□ -1.69
XRN1-206ENST00000467077 ZNF335Q9H4Z2 1342 aaPredicted RBP4.51□□□□□ -1.69
XRN1-206ENST00000467077 A0A087WWL8 130 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 RPS10-NUDT3A0A1W2PQS6 291 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 LOC105371045A0A1W2PR82 267 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 ANKRD62A6NC57 917 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 PRPF4O43172 522 aaKnown RBP eCLIP4.51□□□□□ -1.69
XRN1-206ENST00000467077 UGDHO60701 494 aa4.51□□□□□ -1.69
XRN1-206ENST00000467077 ZRANB2O95218 330 aaKnown RBP eCLIP4.51□□□□□ -1.69
XRN1-206ENST00000467077 CCND1P24385 295 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms