RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 BLOC1S4Q9NUP1 217 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 AGPAT5Q9NUQ2 364 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 TMEM161AQ9NX61 479 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 MIOSQ9NXC5 875 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 CACNG4Q9UBN1 327 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 DNAJB4Q9UDY4 337 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 ST6GALNAC2Q9UJ37 374 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 FBXO2Q9UK22 296 aaPredicted RBP5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 ZDHHC9Q9Y397 364 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 KIF3AQ9Y496 699 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 PCDHB7Q9Y5E2 793 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 CITO14578 2027 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 LRRIQ4A6NIV6 560 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 C1QTNF3-AMACRE9PGA6 284 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 INO80B-WBP1J3KQ70 363 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 LAD1O00515 517 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 MATN3O15232 486 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 LINC01565O15544 149 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 ASAP2O43150 1006 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 PRODHO43272 600 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 DKC1O60832 514 aaKnown RBP eCLIP5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 HIP1RO75146 1068 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 OFD1O75665 1012 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 CYP7B1O75881 506 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 DDHD2O94830 711 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 EYA4O95677 639 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 ZSCAN20P17040 1043 aaPredicted RBP5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 CYP11B2P19099 503 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 SFPQP23246 707 aaKnown RBP eCLIP5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 SLC12A3P55017 1021 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 KARSQ15046 597 aaKnown RBP5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 SURF1Q15526 300 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 NAALADL2Q58DX5 795 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 TCEAL5Q5H9L2 206 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 PHF19Q5T6S3 580 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 CDCA2Q69YH5 1023 aaPredicted RBP5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 TWF2Q6IBS0 349 aaKnown RBP5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 TRMT10BQ6PF06 316 aaKnown RBP5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 KCNT2Q6UVM3 1135 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 OTOP3Q7RTS5 596 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 BRAPQ7Z569 592 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 SRGAP1Q7Z6B7 1085 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 MRPL10Q7Z7H8 261 aaKnown RBP5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 COLGALT1Q8NBJ5 622 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 ERMNQ8TAM6 284 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 TCP11Q8WWU5 503 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 AARSD1Q9BTE6 412 aaKnown RBP5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 VN1R3Q9BXE9 311 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 INO80BQ9C086 356 aaPredicted RBP5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 CSRNP2Q9H175 543 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 IKZF4Q9H2S9 585 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 NXF3Q9H4D5 531 aaKnown RBP5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 ELAC1Q9H777 363 aaKnown RBP5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 ARHGEF4Q9NR80 690 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 CHST12Q9NRB3 414 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 C1orf112Q9NSG2 853 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 TBC1D13Q9NVG8 400 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 FTSJ1Q9UET6 329 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 IPPQ9Y573 584 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 PCDHB2Q9Y5E7 798 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 DOCK6Q96HP0 2047 aa5.28□□□□□ -1.56
EXOSC3-204ENST00000465860 C2orf16Q68DN1 1984 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 A0A1B0GUA9 196 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 ARHGEF35A5YM69 484 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 ZNF623O75123 536 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 FGF18O76093 207 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 NPTXRO95502 500 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 LTFP02788 710 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 STAG3L1P0CL83 205 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 COL6A2P12110 1019 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 MUTP22033 750 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 AKAP5P24588 427 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 NPTX2P47972 431 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 CDC42EP1Q00587 391 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 POU5F1BQ06416 359 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 HYAL1Q12794 435 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 DHX8Q14562 1220 aaKnown RBP5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 MXD4Q14582 209 aaPredicted RBP5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 ICAM4Q14773 271 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 SLC39A14Q15043 492 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 KRT79Q5XKE5 535 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 ARL6IP4Q66PJ3 421 aaKnown RBP5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 HAUS3Q68CZ6 603 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 TRIM48Q8IWZ4 208 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 KBTBD2Q8IY47 623 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 KLHL36Q8N4N3 616 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 SYT2Q8N9I0 419 aaPredicted RBP5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 GSTCDQ8NEC7 633 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 MCPH1Q8NEM0 835 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 VN1R2Q8NFZ6 395 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 POF1BQ8WVV4 589 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 AUTS2Q8WXX7 1259 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 RABGGTAQ92696 567 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 MRPL38Q96DV4 380 aaKnown RBP5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 ZBTB45Q96K62 511 aaPredicted RBP5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 CCDC43Q96MW1 224 aaKnown RBP5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 JPH2Q9BR39 696 aaPredicted RBP5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 PAAF1Q9BRP4 392 aa5.27□□□□□ -1.57
EXOSC3-204ENST00000465860 APOL6Q9BWW8 343 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms