RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 RPS9P46781 194 aaKnown RBP8.08□□□□□ -1.12
THBS3-205ENST00000465596 GABRB2P47870 512 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 ZNF445P59923 1031 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 POLR2FP61218 127 aaKnown RBP8.08□□□□□ -1.12
THBS3-205ENST00000465596 NOMO3P69849 1222 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 PITX1P78337 314 aaPredicted RBP8.08□□□□□ -1.12
THBS3-205ENST00000465596 FMO1Q01740 532 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 UBXN1Q04323 297 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 PTP4A2Q12974 167 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 RUNX3Q13761 415 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 RAPGEF1Q13905 1077 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 TAF5Q15542 800 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 ITPRIPL2Q3MIP1 535 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 TMEM196Q5HYL7 178 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 BSPRYQ5W0U4 402 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 FSTL4Q6MZW2 842 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 TRNP1Q6NT89 227 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 RHBDF2Q6PJF5 856 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 OLFML1Q6UWY5 402 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 BEND5Q7L4P6 421 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 BNIPLQ7Z465 357 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 IRF2BP2Q7Z5L9 587 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 C12orf40Q86WS4 652 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 RALGPS2Q86X27 583 aaPredicted RBP8.08□□□□□ -1.12
THBS3-205ENST00000465596 PASD1Q8IV76 773 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 SFTPA1Q8IWL2 248 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 BBS7Q8IWZ6 715 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 SCUBE3Q8IX30 993 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 ETFBKMTQ8IXQ9 262 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 ADGRG2Q8IZP9 1017 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 C1orf131Q8NDD1 294 aaKnown RBP8.08□□□□□ -1.12
THBS3-205ENST00000465596 MSANTD3Q96H12 275 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 DNAI2Q9GZS0 605 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 C8orf33Q9H7E9 229 aaPredicted RBP8.08□□□□□ -1.12
THBS3-205ENST00000465596 ECT2Q9H8V3 914 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 NLRC4Q9NPP4 1024 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 C2orf42Q9NWW7 574 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 DUS2Q9NX74 493 aaKnown RBP8.08□□□□□ -1.12
THBS3-205ENST00000465596 CALCOCO1Q9P1Z2 691 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 STOML2Q9UJZ1 356 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 NAGPAQ9UK23 515 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 FBXL21Q9UKT6 434 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 SPEGQ15772 3267 aa8.08□□□□□ -1.12
THBS3-205ENST00000465596 DOCK9Q9BZ29 2069 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 SMTNL1A8MU46 457 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 DPYSL4O14531 572 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 TRDMT1O14717 391 aaKnown RBP8.07□□□□□ -1.12
THBS3-205ENST00000465596 HOXC11O43248 304 aaPredicted RBP8.07□□□□□ -1.12
THBS3-205ENST00000465596 AP5Z1O43299 807 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 MED7O43513 233 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 GALR2O43603 387 aaPredicted RBP8.07□□□□□ -1.12
THBS3-205ENST00000465596 GFPT2O94808 682 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 FBXO21O94952 628 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 CAVIN2O95810 425 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 ABL1P00519 1130 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 LTFP02788 710 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 CYP1A1P04798 512 aaPredicted RBP8.07□□□□□ -1.12
THBS3-205ENST00000465596 DCNP07585 359 aaKnown RBP8.07□□□□□ -1.12
THBS3-205ENST00000465596 MMEP08473 750 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 LCP1P13796 627 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 COL9A1P20849 921 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 ATP5C1P36542 298 aaKnown RBP8.07□□□□□ -1.12
THBS3-205ENST00000465596 PI4KAP42356 2102 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 TRIP4Q15650 581 aaPredicted RBP8.07□□□□□ -1.12
THBS3-205ENST00000465596 FIGNQ5HY92 759 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 SYPL2Q5VXT5 272 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 PKN3Q6P5Z2 889 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 LRSAM1Q6UWE0 723 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 MAMSTRQ6ZN01 415 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 FAM183BPQ6ZVS7 135 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 DDX42Q86XP3 938 aaKnown RBP eCLIP8.07□□□□□ -1.12
THBS3-205ENST00000465596 ABCA7Q8IZY2 2146 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 FLCNQ8NFG4 579 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 TTC8Q8TAM2 541 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 EDEM1Q92611 657 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 NELL1Q92832 810 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 ATP2A3Q93084 1043 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 SLC39A13Q96H72 371 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 SLC2A13Q96QE2 648 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 PCDHB18PQ96TA0 734 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 CHRDQ9H2X0 955 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 PRMT8Q9NR22 394 aaPredicted RBP8.07□□□□□ -1.12
THBS3-205ENST00000465596 MARK1Q9P0L2 795 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 DNMT3LQ9UJW3 386 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 HCN2Q9UL51 889 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 ARIH1Q9Y4X5 557 aaPredicted RBP8.07□□□□□ -1.12
THBS3-205ENST00000465596 THADAQ6YHU6 1953 aa8.07□□□□□ -1.12
THBS3-205ENST00000465596 NUMA1Q14980 2115 aa8.06□□□□□ -1.12
THBS3-205ENST00000465596 CEP250Q9BV73 2442 aa8.06□□□□□ -1.12
THBS3-205ENST00000465596 TCRBV5S1A1TA0A578 114 aa8.06□□□□□ -1.12
THBS3-205ENST00000465596 I6L893 689 aaPredicted RBP8.06□□□□□ -1.12
THBS3-205ENST00000465596 PES1O00541 588 aaKnown RBP8.06□□□□□ -1.12
THBS3-205ENST00000465596 MAN2B1O00754 1011 aa8.06□□□□□ -1.12
THBS3-205ENST00000465596 MSI1O43347 362 aaKnown RBP8.06□□□□□ -1.12
THBS3-205ENST00000465596 LSM8O95777 96 aaKnown RBP8.06□□□□□ -1.12
THBS3-205ENST00000465596 UNGP13051 313 aaPredicted RBP8.06□□□□□ -1.12
THBS3-205ENST00000465596 HOXC13P31276 330 aa8.06□□□□□ -1.12
THBS3-205ENST00000465596 USP8P40818 1118 aa8.06□□□□□ -1.12
THBS3-205ENST00000465596 NUBP1P53384 320 aa8.06□□□□□ -1.12
THBS3-205ENST00000465596 GSCP56915 257 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms