RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 FAM234AQ9H0X4 552 aa6.08□□□□□ -1.44
SMC4-205ENST00000465563 CHST8Q9H2A9 424 aa6.08□□□□□ -1.44
SMC4-205ENST00000465563 C1orf112Q9NSG2 853 aa6.08□□□□□ -1.44
SMC4-205ENST00000465563 DNAJB11Q9UBS4 358 aa6.08□□□□□ -1.44
SMC4-205ENST00000465563 DKK4Q9UBT3 224 aa6.08□□□□□ -1.44
SMC4-205ENST00000465563 PRPF3O43395 683 aaKnown RBP6.07□□□□□ -1.44
SMC4-205ENST00000465563 NTSR1P30989 418 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 HTR6P50406 440 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 NANOS2P60321 138 aaKnown RBP6.07□□□□□ -1.44
SMC4-205ENST00000465563 IGBP1P78318 339 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 FMO1Q01740 532 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 SEMA3AQ14563 771 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 MZT2AQ6P582 158 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 LVRNQ6Q4G3 990 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 CLEC9AQ6UXN8 241 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 MMP21Q8N119 569 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 ACRBPQ8NEB7 543 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 IGFBPL1Q8WX77 278 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 CINPQ9BW66 212 aaPredicted RBP6.07□□□□□ -1.44
SMC4-205ENST00000465563 NUAK2Q9H093 628 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 FAM204AQ9H8W3 233 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 COL20A1Q9P218 1284 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 ITGB1BP2Q9UKP3 347 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 OGDHLQ9ULD0 1010 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 SLC27A6Q9Y2P4 619 aa6.07□□□□□ -1.44
SMC4-205ENST00000465563 IL1R1P14778 569 aa6.06□□□□□ -1.44
SMC4-205ENST00000465563 BTF3P20290 206 aaKnown RBP6.06□□□□□ -1.44
SMC4-205ENST00000465563 CACNB3P54284 484 aa6.06□□□□□ -1.44
SMC4-205ENST00000465563 CCDC15Q0P6D6 951 aa6.06□□□□□ -1.44
SMC4-205ENST00000465563 KPNB1Q14974 876 aaKnown RBP6.06□□□□□ -1.44
SMC4-205ENST00000465563 CLCA4Q14CN2 919 aa6.06□□□□□ -1.44
SMC4-205ENST00000465563 MINDY4Q4G0A6 757 aa6.06□□□□□ -1.44
SMC4-205ENST00000465563 EARS2Q5JPH6 523 aaKnown RBP6.06□□□□□ -1.44
SMC4-205ENST00000465563 DAB2IPQ5VWQ8 1189 aa6.06□□□□□ -1.44
SMC4-205ENST00000465563 PLAG1Q6DJT9 500 aa6.06□□□□□ -1.44
SMC4-205ENST00000465563 ZNF793Q6ZN11 406 aa6.06□□□□□ -1.44
SMC4-205ENST00000465563 IPCEF1Q8WWN9 437 aaPredicted RBP6.06□□□□□ -1.44
SMC4-205ENST00000465563 LRRC27Q9C0I9 530 aa6.06□□□□□ -1.44
SMC4-205ENST00000465563 ARL8BQ9NVJ2 186 aa6.06□□□□□ -1.44
SMC4-205ENST00000465563 SPATA31A1Q5TZJ5 1347 aa6.05□□□□□ -1.44
SMC4-205ENST00000465563 CA12O43570 354 aa6.05□□□□□ -1.44
SMC4-205ENST00000465563 PRAMEF2O60811 474 aa6.05□□□□□ -1.44
SMC4-205ENST00000465563 RBL1P28749 1068 aa6.05□□□□□ -1.44
SMC4-205ENST00000465563 JAK3P52333 1124 aa6.05□□□□□ -1.44
SMC4-205ENST00000465563 KCNAB1Q14722 419 aa6.05□□□□□ -1.44
SMC4-205ENST00000465563 ZDHHC12Q96GR4 267 aa6.05□□□□□ -1.44
SMC4-205ENST00000465563 TM2D2Q9BX73 214 aa6.05□□□□□ -1.44
SMC4-205ENST00000465563 ZNF287Q9HBT7 754 aa6.05□□□□□ -1.44
SMC4-205ENST00000465563 NOB1Q9ULX3 412 aaKnown RBP6.05□□□□□ -1.44
SMC4-205ENST00000465563 C2CD4BA6NLJ0 364 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 USP12O75317 370 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 MAP4K4O95819 1239 aaPredicted RBP6.04□□□□□ -1.44
SMC4-205ENST00000465563 PLAUP00749 431 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 TMEM225BP0DP42 221 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 COPAP53621 1224 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 B4GALNT1Q00973 533 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 ERV3-1Q14264 604 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 UNC13DQ70J99 1090 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 WIPF2Q8TF74 440 aaPredicted RBP6.04□□□□□ -1.44
SMC4-205ENST00000465563 LRTOMTQ8WZ04 291 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 APIPQ96GX9 242 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 SCNM1Q9BWG6 230 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 HIPK2Q9H2X6 1198 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 SEMA4BQ9NPR2 832 aaPredicted RBP6.04□□□□□ -1.44
SMC4-205ENST00000465563 ZBTB40Q9NUA8 1239 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 TMEM45AQ9NWC5 275 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 SEMA5BQ9P283 1151 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 VPS51Q9UID3 782 aa6.04□□□□□ -1.44
SMC4-205ENST00000465563 IGLV5-39A0A0G2JS06 123 aa6.03□□□□□ -1.44
SMC4-205ENST00000465563 PRR23D1E9PI22 279 aaPredicted RBP6.03□□□□□ -1.44
SMC4-205ENST00000465563 RRHO14718 337 aa6.03□□□□□ -1.44
SMC4-205ENST00000465563 SMAD6O43541 496 aaKnown RBP6.03□□□□□ -1.44
SMC4-205ENST00000465563 PRR23D2P0DMB1 279 aaPredicted RBP6.03□□□□□ -1.44
SMC4-205ENST00000465563 GALNSP34059 522 aa6.03□□□□□ -1.44
SMC4-205ENST00000465563 POLD3Q15054 466 aaPredicted RBP6.03□□□□□ -1.44
SMC4-205ENST00000465563 ARHGAP29Q52LW3 1261 aa6.03□□□□□ -1.44
SMC4-205ENST00000465563 MANEALQ5VSG8 457 aa6.03□□□□□ -1.44
SMC4-205ENST00000465563 RNF220Q5VTB9 566 aa6.03□□□□□ -1.44
SMC4-205ENST00000465563 P3H2Q8IVL5 708 aa6.03□□□□□ -1.44
SMC4-205ENST00000465563 FSTL5Q8N475 847 aaPredicted RBP6.03□□□□□ -1.44
SMC4-205ENST00000465563 BCAS4Q8TDM0 211 aa6.03□□□□□ -1.44
SMC4-205ENST00000465563 TRMT61AQ96FX7 289 aaKnown RBP6.03□□□□□ -1.44
SMC4-205ENST00000465563 VPS45Q9NRW7 570 aa6.03□□□□□ -1.44
SMC4-205ENST00000465563 CAPN11Q9UMQ6 739 aa6.03□□□□□ -1.44
SMC4-205ENST00000465563 TTBK1Q5TCY1 1321 aaPredicted RBP6.02□□□□□ -1.45
SMC4-205ENST00000465563 TMIGD3P0DMS9 266 aaPredicted RBP6.02□□□□□ -1.45
SMC4-205ENST00000465563 MYF5P13349 255 aa6.02□□□□□ -1.45
SMC4-205ENST00000465563 CARSP49589 748 aaKnown RBP6.02□□□□□ -1.45
SMC4-205ENST00000465563 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
SMC4-205ENST00000465563 WDR5P61964 334 aaKnown RBP6.02□□□□□ -1.45
SMC4-205ENST00000465563 MANEAQ5SRI9 462 aa6.02□□□□□ -1.45
SMC4-205ENST00000465563 FAM102BQ5T8I3 360 aa6.02□□□□□ -1.45
SMC4-205ENST00000465563 ZNF549Q6P9A3 640 aa6.02□□□□□ -1.45
SMC4-205ENST00000465563 FAM57BQ71RH2 274 aa6.02□□□□□ -1.45
SMC4-205ENST00000465563 SESTD1Q86VW0 696 aa6.02□□□□□ -1.45
SMC4-205ENST00000465563 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.02□□□□□ -1.45
SMC4-205ENST00000465563 THOC3Q96J01 351 aaKnown RBP6.02□□□□□ -1.45
SMC4-205ENST00000465563 NLRP4Q96MN2 994 aa6.02□□□□□ -1.45
SMC4-205ENST00000465563 FCRL5Q96RD9 977 aa6.02□□□□□ -1.45
SMC4-205ENST00000465563 HPSEQ9Y251 543 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms