RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 GKAP1Q5VSY0 366 aaPredicted RBP20.49■□□□□ 0.87
POLR2J3-203ENST00000464525 ZDHHC17Q8IUH5 632 aa20.49■□□□□ 0.87
POLR2J3-203ENST00000464525 NETO2Q8NC67 525 aa20.49■□□□□ 0.87
POLR2J3-203ENST00000464525 FAM149B1Q96BN6 582 aa20.49■□□□□ 0.87
POLR2J3-203ENST00000464525 UNC93B1Q9H1C4 597 aa20.49■□□□□ 0.87
POLR2J3-203ENST00000464525 MFHAS1Q9Y4C4 1052 aa20.49■□□□□ 0.87
POLR2J3-203ENST00000464525 NR2E3Q9Y5X4 410 aa20.49■□□□□ 0.87
POLR2J3-203ENST00000464525 SYNJ2BP-COX16A0A087WUM0 186 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 TEKT4Q8WW24 435 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 CABS1Q96KC9 395 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 PAAF1Q9BRP4 392 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 TSPYL2Q9H2G4 693 aaPredicted RBP20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 MTMR10Q9NXD2 777 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 COX16Q9P0S2 106 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 CABYRO75952 493 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 CYP2F1P24903 491 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 STIP1P31948 543 aaKnown RBP20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 GBE1Q04446 702 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 SLC10A2Q12908 348 aaPredicted RBP20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 C3orf62Q6ZUJ4 267 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 FAM131BQ86XD5 332 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 CACNA2D3Q8IZS8 1091 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 CENPIQ92674 756 aaPredicted RBP20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 STARD7Q9NQZ5 370 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 FAM105AQ9NUU6 356 aa20.48■□□□□ 0.87
POLR2J3-203ENST00000464525 MOXD2PA6NHM9 499 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 MDM4O15151 490 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 KIAA0754O94854 1291 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 PTPN1P18031 435 aaKnown RBP20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 PTPN9P43378 593 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 RPL34P49207 117 aaKnown RBP20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 CLCNKBP51801 687 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 SNX16P57768 344 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 SPRED3Q2MJR0 410 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 MDH1BQ5I0G3 518 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 SLC9A4Q6AI14 798 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 DEFB106AQ8N104 65 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 OTUD6BQ8N6M0 293 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 C3orf58Q8NDZ4 430 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 TNIP3Q96KP6 325 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 ELAC2Q9BQ52 826 aaKnown RBP20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 BEGAINQ9BUH8 593 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 NRDE2Q9H7Z3 1164 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 RABGEF1Q9UJ41 708 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 PADI3Q9ULW8 664 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 AP4E1Q9UPM8 1137 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 CHMP2BQ9UQN3 213 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 LRPAP1P30533 357 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 MTFR1Q15390 333 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 TADA2BQ86TJ2 420 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 CNPY4Q8N129 248 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 KCTD15Q96SI1 283 aaPredicted RBP20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 RAB6BQ9NRW1 208 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 ETNK2Q9NVF9 386 aa20.47■□□□□ 0.87
POLR2J3-203ENST00000464525 A0A1W2PPM1 405 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 TCP11X1B4DZS4 312 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 WARSP23381 471 aaKnown RBP20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 PTK7Q13308 1070 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 DCAF6Q58WW2 860 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 MICALCLQ6ZW33 695 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 CTU1Q7Z7A3 348 aaKnown RBP20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 RPAINQ86UA6 219 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 TRABD2AQ86V40 505 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 C4orf33Q8N1A6 199 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 TOP6BLQ8N6T0 577 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 FAF2Q96CS3 445 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 SENP8Q96LD8 212 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 HNRNPABQ99729 332 aaKnown RBP20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 DUSP16Q9BY84 665 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 CCDC134Q9H6E4 229 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 MGEA5O60502 916 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 KRT15P19012 456 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 PRMT2P55345 433 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 MAP3K7CLP57077 242 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 LPIN1Q14693 890 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 TRIM71Q2Q1W2 868 aaKnown RBP20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 PDIK1LQ8N165 341 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 RNF169Q8NCN4 708 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 CCDC110Q8TBZ0 833 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 FBF1Q8TES7 1133 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 HSFY1Q96LI6 401 aa20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 DDX43Q9NXZ2 648 aaKnown RBP20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 ZMYND8Q9ULU4 1186 aaPredicted RBP20.46■□□□□ 0.87
POLR2J3-203ENST00000464525 CASTOR2A6NHX0 329 aa20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 XPO1O14980 1071 aaKnown RBP20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 SCNN1GP51170 649 aa20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 DPYSL2Q16555 572 aa20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 HFE2Q6ZVN8 426 aa20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 SPATS2Q86XZ4 545 aaKnown RBP20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 AGGF1Q8N302 714 aaeCLIP20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 ZNF670Q9BS34 389 aa20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 MED10Q9BTT4 135 aa20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 CRTAC1Q9NQ79 661 aa20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 FGFR1OP2Q9NVK5 253 aa20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 E7ESA3 106 aa20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 I3L4J1 428 aa20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 ZBED1O96006 694 aa20.45■□□□□ 0.86
POLR2J3-203ENST00000464525 GOT1P17174 413 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms