RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 UGT1A10Q9HAW8 530 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 UGT1A8Q9HAW9 530 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 PNPLA8Q9NP80 782 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 FBXO6Q9NRD1 293 aaPredicted RBP17.57■□□□□ 0.4
ACTB-207ENST00000462494 SCN1AP35498 2009 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 F5H423 210 aaPredicted RBP17.56■□□□□ 0.4
ACTB-207ENST00000462494 MDM4O15151 490 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 HAUS5O94927 633 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 METTL18O95568 372 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 PDGFRBP09619 1106 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 LCP1P13796 627 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 PTPN4P29074 926 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 ADORA2AP29274 412 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 ADORA2BP29275 332 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 SERPINB3P29508 390 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 GRIK4Q16099 956 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 CTC1Q2NKJ3 1217 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 KIRREL3Q8IZU9 778 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 VPS52Q8N1B4 723 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 MECRQ9BV79 373 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 FRMD8Q9BZ67 464 aaPredicted RBP17.56■□□□□ 0.4
ACTB-207ENST00000462494 SAR1AQ9NR31 198 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 SMYD2Q9NRG4 433 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 LOC102724159A0A0B4J2E5 919 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 SLC15A5A6NIM6 579 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 A8MXQ7 604 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 APOEP02649 317 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 C1QAP02745 245 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 PWP2Q15269 919 aaKnown RBP17.56■□□□□ 0.4
ACTB-207ENST00000462494 LGSNQ5TDP6 509 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 UNC5AQ6ZN44 842 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 CDKL3Q8IVW4 592 aaPredicted RBP17.56■□□□□ 0.4
ACTB-207ENST00000462494 PPP1R13LQ8WUF5 828 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 FAM49AQ9H0Q0 323 aaPredicted RBP17.56■□□□□ 0.4
ACTB-207ENST00000462494 KCNK13Q9HB14 408 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 PLAC1Q9HBJ0 212 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 NR2E3Q9Y5X4 410 aa17.56■□□□□ 0.4
ACTB-207ENST00000462494 CCDC130P13994 396 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 L1CAMP32004 1257 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 SLC10A2Q12908 348 aaPredicted RBP17.55■□□□□ 0.4
ACTB-207ENST00000462494 SPDYAQ5MJ70 313 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 MARCH8Q5T0T0 291 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 MPP5Q8N3R9 675 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 ARMC2Q8NEN0 867 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 PRR11Q96HE9 360 aaPredicted RBP17.55■□□□□ 0.4
ACTB-207ENST00000462494 APOL6Q9BWW8 343 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 EIF2AQ9BY44 585 aaKnown RBP17.55■□□□□ 0.4
ACTB-207ENST00000462494 ARL8BQ9NVJ2 186 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 MTO1Q9Y2Z2 717 aaKnown RBP17.55■□□□□ 0.4
ACTB-207ENST00000462494 ZSWIM8A7E2V4 1837 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 CCDC195A0A1B0GUA6 201 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 TRDMT1O14717 391 aaKnown RBP17.55■□□□□ 0.4
ACTB-207ENST00000462494 MYL2P10916 166 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 GM2AP17900 193 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 SNX16P57768 344 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 NAA25Q14CX7 972 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 ANKRD20A3Q5VUR7 823 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 TRMT10BQ6PF06 316 aaKnown RBP17.55■□□□□ 0.4
ACTB-207ENST00000462494 USP6NLQ92738 828 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 NUDCD1Q96RS6 583 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 FAM124BQ9H5Z6 455 aaPredicted RBP17.55■□□□□ 0.4
ACTB-207ENST00000462494 LNPEPQ9UIQ6 1025 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 AP4E1Q9UPM8 1137 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 COL1A2P08123 1366 aa17.55■□□□□ 0.4
ACTB-207ENST00000462494 FAM237BA0A1B0GVD1 139 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 H0Y3Z8 333 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 TRAFD1O14545 582 aaPredicted RBP17.54■□□□□ 0.4
ACTB-207ENST00000462494 PEX11AO75192 247 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 DLDP09622 509 aaKnown RBP17.54■□□□□ 0.4
ACTB-207ENST00000462494 SETSIPP0DME0 302 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 CSH1P0DML2 217 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 CSH2P0DML3 217 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 PRKCHP24723 683 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 GRIA1P42261 906 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 CDK16Q00536 496 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 ZNF792Q3KQV3 632 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 DCAF4L1Q3SXM0 396 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 ANKRD20A2Q5SQ80 823 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 MROH9Q5TGP6 573 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 ANKRD20A1Q5TYW2 823 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 KCNT2Q6UVM3 1135 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 CATSPER4Q7RTX7 472 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 TTC8Q8TAM2 541 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 ZNF570Q96NI8 536 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 RNPEPL1Q9HAU8 725 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 VTA1Q9NP79 307 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 SETD4Q9NVD3 440 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 CNTN3Q9P232 1028 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 ZNF180Q9UJW8 692 aa17.54■□□□□ 0.4
ACTB-207ENST00000462494 ENTPD5O75356 428 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 TGDSO95455 350 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 SOWAHAQ2M3V2 549 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 GPRC5AQ8NFJ5 357 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 BEST2Q8NFU1 509 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 MIPEPQ99797 713 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 DENND2DQ9H6A0 471 aaPredicted RBP17.53■□□□□ 0.4
ACTB-207ENST00000462494 PCMTD2Q9NV79 361 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.53■□□□□ 0.4
ACTB-207ENST00000462494 PLLPQ9Y342 182 aa17.53■□□□□ 0.4
ACTB-207ENST00000462494 MFHAS1Q9Y4C4 1052 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms