RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 NUSAP1Q9BXS6 441 aaKnown RBP16.97■□□□□ 0.31
COL7A1-204ENST00000462475 IMPG2Q9BZV3 1241 aa16.97■□□□□ 0.31
COL7A1-204ENST00000462475 MMRN2Q9H8L6 949 aa16.97■□□□□ 0.31
COL7A1-204ENST00000462475 CYP3A43Q9HB55 503 aa16.97■□□□□ 0.31
COL7A1-204ENST00000462475 CD248Q9HCU0 757 aa16.97■□□□□ 0.31
COL7A1-204ENST00000462475 FSCN3Q9NQT6 498 aa16.97■□□□□ 0.31
COL7A1-204ENST00000462475 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.97■□□□□ 0.31
COL7A1-204ENST00000462475 LSM7Q9UK45 103 aaKnown RBP16.97■□□□□ 0.31
COL7A1-204ENST00000462475 PILRBQ9UKJ0 227 aa16.97■□□□□ 0.31
COL7A1-204ENST00000462475 MAPK8IP1Q9UQF2 711 aa16.97■□□□□ 0.31
COL7A1-204ENST00000462475 PCDHA5Q9Y5H7 936 aa16.97■□□□□ 0.31
COL7A1-204ENST00000462475 TNRC6BQ9UPQ9 1833 aaKnown RBP16.96■□□□□ 0.31
COL7A1-204ENST00000462475 CILPO75339 1184 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 RHOBTB3O94955 611 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 ENGP17813 658 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 NDUFV2P19404 249 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 SYKP43405 635 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 NDUFA8P51970 172 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 KIF11P52732 1056 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 RPL6Q02878 288 aaKnown RBP16.96■□□□□ 0.31
COL7A1-204ENST00000462475 GOLGA8FQ08AF8 430 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 GOLGA8DPQ0D2H9 430 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 DPYDQ12882 1025 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 LMAN2Q12907 356 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 NFIL3Q16649 462 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 SPDYCQ5MJ68 293 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 C10orf120Q5SQS8 335 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 PEAR1Q5VY43 1037 aaPredicted RBP16.96■□□□□ 0.31
COL7A1-204ENST00000462475 KIAA1211LQ6NV74 962 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 Q6ZNB5 142 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 INTS8Q75QN2 995 aaKnown RBP16.96■□□□□ 0.31
COL7A1-204ENST00000462475 SCD5Q86SK9 330 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 FAM186BQ8IYM0 893 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 CHPFQ8IZ52 775 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 DEFB124Q8NES8 71 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 BHMTQ93088 406 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 SPATA32Q96LK8 384 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 XPO6Q96QU8 1125 aaKnown RBP16.96■□□□□ 0.31
COL7A1-204ENST00000462475 PNPLA8Q9NP80 782 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 WASF3Q9UPY6 502 aa16.96■□□□□ 0.31
COL7A1-204ENST00000462475 CHD6Q8TD26 2715 aa16.96■□□□□ 0.3
COL7A1-204ENST00000462475 PLXND1Q9Y4D7 1925 aa16.96■□□□□ 0.3
COL7A1-204ENST00000462475 IGHV1OR15-9A0A0B4J2B8 117 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 AP5Z1O43299 807 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 KIF20AO95235 890 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 TOP3BO95985 862 aaKnown RBP16.95■□□□□ 0.3
COL7A1-204ENST00000462475 CFIP05156 583 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 CEACAM1P13688 526 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 TRIM21P19474 475 aaKnown RBP16.95■□□□□ 0.3
COL7A1-204ENST00000462475 SPINK2P20155 84 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 PPP1R26Q5T8A7 1209 aaPredicted RBP16.95■□□□□ 0.3
COL7A1-204ENST00000462475 KLHDC10Q6PID8 442 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 SLC23A3Q6PIS1 610 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 IPO4Q8TEX9 1081 aaKnown RBP16.95■□□□□ 0.3
COL7A1-204ENST00000462475 GABRG3Q99928 467 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 CD93Q9NPY3 652 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 CACNA2D2Q9NY47 1150 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 PLK2Q9NYY3 685 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 WDR35Q9P2L0 1181 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 DNMT3LQ9UJW3 386 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 NAGPAQ9UK23 515 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 ZDHHC9Q9Y397 364 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 RAD54BQ9Y620 910 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 WDFY3Q8IZQ1 3526 aa16.95■□□□□ 0.3
COL7A1-204ENST00000462475 MYO18AQ92614 2054 aaKnown RBP16.94■□□□□ 0.3
COL7A1-204ENST00000462475 FAM237AA0A1B0GTK4 181 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 C1QTNF9BB2RNN3 333 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 STC2O76061 302 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 CISD3P0C7P0 127 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 C1QTNF9P0C862 333 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 KRT13P13646 458 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 PLA2G4AP47712 749 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 DGKGP49619 791 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 ZCWPW2Q504Y3 356 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 ZNF394Q53GI3 561 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 SLC36A4Q6YBV0 504 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 CCDC186Q7Z3E2 898 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 CCDC47Q96A33 483 aaKnown RBP16.94■□□□□ 0.3
COL7A1-204ENST00000462475 DUSP16Q9BY84 665 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 SLC6A17Q9H1V8 727 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 TMEM8AQ9HCN3 771 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 CYP8B1Q9UNU6 501 aa16.94■□□□□ 0.3
COL7A1-204ENST00000462475 ZZEF1O43149 2961 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 KLKB1P03952 638 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 PROS1P07225 676 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 HOXD12P35452 270 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 PSMC2P35998 433 aaKnown RBP16.93■□□□□ 0.3
COL7A1-204ENST00000462475 DPP6P42658 865 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 KRT85P78386 507 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 ZNF33AQ06730 810 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 ENPEPQ07075 957 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 UNQ6494/PRO21346Q6UXR6 183 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 SLC41A1Q8IVJ1 513 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 GUF1Q8N442 669 aaKnown RBP16.93■□□□□ 0.3
COL7A1-204ENST00000462475 SEMA4DQ92854 862 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 GOLPH3LQ9H4A5 285 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 RASAL2Q9UJF2 1139 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 USP3Q9Y6I4 520 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 IGF2RP11717 2491 aa16.93■□□□□ 0.3
COL7A1-204ENST00000462475 GON4LQ3T8J9 2241 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms