RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 NXPE3Q969Y0 559 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 E2F7Q96AV8 911 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 ZFRQ96KR1 1074 aaKnown RBP12.34□□□□□ -0.43
CPNE1-221ENST00000462352 LRRC3BQ96PB8 259 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 PANX2Q96RD6 677 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 UHRF1Q96T88 793 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-221ENST00000462352 TRIM62Q9BVG3 475 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 PLA2G2FQ9BZM2 168 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 DEF6Q9H4E7 631 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 NHEJ1Q9H9Q4 299 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-221ENST00000462352 KIF9Q9HAQ2 790 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 OLA1Q9NTK5 396 aaKnown RBP12.34□□□□□ -0.43
CPNE1-221ENST00000462352 SMPD4Q9NXE4 827 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 OBP2AQ9NY56 170 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 WDR35Q9P2L0 1181 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 RASAL2Q9UJF2 1139 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 DNMT3LQ9UJW3 386 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 NAALADL1Q9UQQ1 740 aa12.34□□□□□ -0.43
CPNE1-221ENST00000462352 GOLGA6L6A8MZA4 724 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 LEFTY2O00292 366 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 CAPN9O14815 690 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 DAB1O75553 588 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 FTLP02792 175 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-221ENST00000462352 TCF3P15923 654 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 GFPT1Q06210 699 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-221ENST00000462352 USP4Q13107 963 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 ZNF77Q15935 545 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 SLC18A3Q16572 532 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 SYPL2Q5VXT5 272 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 MSANTD2Q6P1R3 559 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 VITQ6UXI7 678 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 MIB1Q86YT6 1006 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 RNF135Q8IUD6 432 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 MFSD6LQ8IWD5 586 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 DEFB106AQ8N104 65 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 TTC16Q8NEE8 873 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 RIN3Q8TB24 985 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 BPIFB1Q8TDL5 484 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 SH3RF2Q8TEC5 729 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 VCPIP1Q96JH7 1222 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 CCDC42Q96M95 316 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 SLC2A13Q96QE2 648 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 KLF16Q9BXK1 252 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-221ENST00000462352 ISCUQ9H1K1 167 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 GKN1Q9NS71 199 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 MARCH2Q9P0N8 246 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 SFMBT1Q9UHJ3 866 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 NENFQ9UMX5 172 aa12.33□□□□□ -0.44
CPNE1-221ENST00000462352 VCANP13611 3396 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 AKR1B10O60218 316 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 IRF1P10914 325 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 PSMC3P17980 439 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 RRM1P23921 792 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 RNASE9P60153 205 aaKnown RBP12.32□□□□□ -0.44
CPNE1-221ENST00000462352 FCHO2Q0JRZ9 810 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 GRM2Q14416 872 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 DCAF6Q58WW2 860 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 CCDC122Q5T0U0 273 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 ALKBH5Q6P6C2 394 aaKnown RBP12.32□□□□□ -0.44
CPNE1-221ENST00000462352 DDX42Q86XP3 938 aaKnown RBP eCLIP12.32□□□□□ -0.44
CPNE1-221ENST00000462352 SLC44A3Q8N4M1 653 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 C3orf20Q8ND61 904 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 DQX1Q8TE96 717 aaKnown RBP12.32□□□□□ -0.44
CPNE1-221ENST00000462352 DEPDC1BQ8WUY9 529 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 METTL5Q9NRN9 209 aaKnown RBP12.32□□□□□ -0.44
CPNE1-221ENST00000462352 CFAP97Q9P2B7 532 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 TMEM59LQ9UK28 342 aa12.32□□□□□ -0.44
CPNE1-221ENST00000462352 HELZP42694 1942 aaKnown RBP12.31□□□□□ -0.44
CPNE1-221ENST00000462352 TCRBV5S1A1TA0A578 114 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 SLC12A8A0AV02 714 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 ATMINO43313 823 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-221ENST00000462352 MSI1O43347 362 aaKnown RBP12.31□□□□□ -0.44
CPNE1-221ENST00000462352 GJB6O95452 261 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 KRT3P12035 628 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 FECHP22830 423 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 NOS2P35228 1153 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 FLT3P36888 993 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 MATKP42679 507 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 PITX1P78337 314 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-221ENST00000462352 COG7P83436 770 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 TDGQ13569 410 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 MTF1Q14872 753 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 DNAJC24Q6P3W2 148 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 TAC4Q86UU9 113 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 YAF2Q8IY57 180 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 EMC1Q8N766 993 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 JOSD2Q8TAC2 188 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 ADAM32Q8TC27 787 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 WBP2Q969T9 261 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 ZNF653Q96CK0 615 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 TRIM11Q96F44 468 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 SERPINB11Q96P15 392 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 SELENOOQ9BVL4 669 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 TRMT61BQ9BVS5 477 aaKnown RBP12.31□□□□□ -0.44
CPNE1-221ENST00000462352 SMOC2Q9H3U7 446 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 SPTLC3Q9NUV7 552 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.31□□□□□ -0.44
CPNE1-221ENST00000462352 SORCS3Q9UPU3 1222 aa12.31□□□□□ -0.44
CPNE1-221ENST00000462352 E2F8A0AVK6 867 aa12.3□□□□□ -0.44
CPNE1-221ENST00000462352 SIGLEC16A6NMB1 481 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms