RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 THAP12O43422 761 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 MED7O43513 233 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 LETM1O95202 739 aaPredicted RBP16.14■□□□□ 0.17
VARS-219ENST00000461328 PON1P27169 355 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 GNA15P30679 374 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 EIF2DP41214 584 aaKnown RBP16.14■□□□□ 0.17
VARS-219ENST00000461328 SLC6A11P48066 632 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 APBA1Q02410 837 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 EFEMP1Q12805 493 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 CNGA2Q16280 664 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 ANO4Q32M45 955 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 TCP11X2Q5H9J9 407 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 RAB41Q5JT25 222 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 BTBD8Q5XKL5 378 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 LAIR1Q6GTX8 287 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 KLHDC10Q6PID8 442 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 C11orf57Q6ZUT1 292 aaPredicted RBP16.14■□□□□ 0.17
VARS-219ENST00000461328 CEP68Q76N32 757 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 SYT13Q7L8C5 426 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 SCD5Q86SK9 330 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 C12orf40Q86WS4 652 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 CAMKK1Q8N5S9 505 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 ENOX1Q8TC92 643 aaKnown RBP16.14■□□□□ 0.17
VARS-219ENST00000461328 HHIPQ96QV1 700 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 ARHGEF4Q9NR80 690 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 POLR3BQ9NW08 1133 aaPredicted RBP16.14■□□□□ 0.17
VARS-219ENST00000461328 CLIC5Q9NZA1 410 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 STRIP2Q9ULQ0 834 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 GVINP1Q7Z2Y8 2422 aa16.14■□□□□ 0.17
VARS-219ENST00000461328 K7EQS6 105 aa16.13■□□□□ 0.17
VARS-219ENST00000461328 PIK3R2O00459 728 aa16.13■□□□□ 0.17
VARS-219ENST00000461328 APODP05090 189 aa16.13■□□□□ 0.17
VARS-219ENST00000461328 EEF1GP26641 437 aaKnown RBP16.13■□□□□ 0.17
VARS-219ENST00000461328 KDSRQ06136 332 aa16.13■□□□□ 0.17
VARS-219ENST00000461328 DMC1Q14565 340 aa16.13■□□□□ 0.17
VARS-219ENST00000461328 C2orf27AQ580R0 203 aa16.13■□□□□ 0.17
VARS-219ENST00000461328 HTR3DQ70Z44 454 aa16.13■□□□□ 0.17
VARS-219ENST00000461328 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.13■□□□□ 0.17
VARS-219ENST00000461328 ZSWIM1Q9BR11 485 aa16.13■□□□□ 0.17
VARS-219ENST00000461328 SPHK2Q9NRA0 654 aa16.13■□□□□ 0.17
VARS-219ENST00000461328 ST7Q9NRC1 585 aa16.13■□□□□ 0.17
VARS-219ENST00000461328 WDR87Q6ZQQ6 2873 aa16.13■□□□□ 0.17
VARS-219ENST00000461328 EP300Q09472 2414 aaPredicted RBP16.13■□□□□ 0.17
VARS-219ENST00000461328 OTOGLQ3ZCN5 2332 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 FRYLO94915 3013 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 CCDC163A0A0D9SF12 145 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 HOXC11O43248 304 aaPredicted RBP16.12■□□□□ 0.17
VARS-219ENST00000461328 KAT7O95251 611 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 APBB3O95704 486 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 HMBSP08397 361 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 RAPGEF1Q13905 1077 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 PKDCCQ504Y2 493 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 MIIPQ5JXC2 388 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 CAVIN1Q6NZI2 390 aaKnown RBP16.12■□□□□ 0.17
VARS-219ENST00000461328 TMEM25Q86YD3 366 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 GPR161Q8N6U8 529 aaKnown RBP16.12■□□□□ 0.17
VARS-219ENST00000461328 NAT16Q8N8M0 369 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 ANKRD20A12PQ8NF67 263 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 USP33Q8TEY7 942 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 RNF139Q8WU17 664 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 KCTD13Q8WZ19 329 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 NDRG1Q92597 394 aaKnown RBP16.12■□□□□ 0.17
VARS-219ENST00000461328 GOLGA1Q92805 767 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 LSM14BQ9BX40 385 aaKnown RBP16.12■□□□□ 0.17
VARS-219ENST00000461328 CNGB3Q9NQW8 809 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 MARCH2Q9P0N8 246 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 DNAJC12Q9UKB3 198 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 CNTN6Q9UQ52 1028 aa16.12■□□□□ 0.17
VARS-219ENST00000461328 ATG2BQ96BY7 2078 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 GPR179Q6PRD1 2367 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 SLC12A8A0AV02 714 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 AXIN1O15169 862 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 RPP40O75818 363 aaKnown RBP16.11■□□□□ 0.17
VARS-219ENST00000461328 GRIA2P42262 883 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 MRPS21P82921 87 aaKnown RBP16.11■□□□□ 0.17
VARS-219ENST00000461328 MYL5Q02045 173 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 TYRO3Q06418 890 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 PREPLQ4J6C6 727 aaPredicted RBP16.11■□□□□ 0.17
VARS-219ENST00000461328 PM20D1Q6GTS8 502 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 PMF1Q6P1K2 205 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 DENND1BQ6P3S1 775 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 SFTPA1Q8IWL2 248 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 ZNF276Q8N554 614 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 CCDC33Q8N5R6 958 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 SLC35F5Q8WV83 523 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 GAB3Q8WWW8 586 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 MIS12Q9H081 205 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 OLA1Q9NTK5 396 aaKnown RBP16.11■□□□□ 0.17
VARS-219ENST00000461328 TMEM63CQ9P1W3 806 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 DEC1Q9P2X7 70 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 USP18Q9UMW8 372 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 ZNF292O60281 2723 aa16.11■□□□□ 0.17
VARS-219ENST00000461328 DMDP11532 3685 aa16.1■□□□□ 0.17
VARS-219ENST00000461328 TBC1D3BA6NDS4 549 aa16.1■□□□□ 0.17
VARS-219ENST00000461328 ANTXRLA6NF34 631 aa16.1■□□□□ 0.17
VARS-219ENST00000461328 BECN2A8MW95 431 aa16.1■□□□□ 0.17
VARS-219ENST00000461328 NEDD8-MDP1E9PL57 170 aa16.1■□□□□ 0.17
VARS-219ENST00000461328 GREM1O60565 184 aa16.1■□□□□ 0.17
VARS-219ENST00000461328 TULP3O75386 442 aa16.1■□□□□ 0.17
VARS-219ENST00000461328 STC2O76061 302 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms