RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 GOLGA1Q92805 767 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 DNASE1L2Q92874 299 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 RSPRY1Q96DX4 576 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 SLC22A12Q96S37 553 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 RPP25Q9BUL9 199 aaKnown RBP11.61□□□□□ -0.55
APTX-209ENST00000460940 TRMT61BQ9BVS5 477 aaKnown RBP11.61□□□□□ -0.55
APTX-209ENST00000460940 SMG9Q9H0W8 520 aaKnown RBP11.61□□□□□ -0.55
APTX-209ENST00000460940 NUCKS1Q9H1E3 243 aaKnown RBP11.61□□□□□ -0.55
APTX-209ENST00000460940 DEF6Q9H4E7 631 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 CCSER2Q9H7U1 834 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 THG1LQ9NWX6 298 aaKnown RBP11.61□□□□□ -0.55
APTX-209ENST00000460940 EFCAB8A8MWE9 144 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 CHADO15335 359 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 COCHO43405 550 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 CFHP08603 1231 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 MBL2P11226 248 aaPredicted RBP11.61□□□□□ -0.55
APTX-209ENST00000460940 RARGP13631 454 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 ATP5C1P36542 298 aaKnown RBP11.61□□□□□ -0.55
APTX-209ENST00000460940 GSCP56915 257 aaPredicted RBP11.61□□□□□ -0.55
APTX-209ENST00000460940 ZNF77Q15935 545 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 BHLHA9Q7RTU4 235 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 C1orf131Q8NDD1 294 aaKnown RBP11.61□□□□□ -0.55
APTX-209ENST00000460940 KHSRPQ92945 711 aaKnown RBP eCLIP11.61□□□□□ -0.556e-6■□□□□ 9.5
APTX-209ENST00000460940 IRF7Q92985 503 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 PPP1R13BQ96KQ4 1090 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 CYP2S1Q96SQ9 504 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 PLA2G2FQ9BZM2 168 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 MIS12Q9H081 205 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 NMUR1Q9HB89 426 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 TRPV5Q9NQA5 729 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 OLA1Q9NTK5 396 aaKnown RBP11.61□□□□□ -0.55
APTX-209ENST00000460940 CYTH4Q9UIA0 394 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 CCL26Q9Y258 94 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 CPQQ9Y646 472 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 MUC3AQ02505 3323 aa11.61□□□□□ -0.55
APTX-209ENST00000460940 LRRC53A6NM62 1247 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 DLL1O00548 723 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 ZNF263O14978 683 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 NARSO43776 548 aaKnown RBP11.6□□□□□ -0.55
APTX-209ENST00000460940 GABBR2O75899 941 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 PGFP49763 221 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 GOLGA8FQ08AF8 430 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 GOLGA8DPQ0D2H9 430 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 TRIM14Q14142 442 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 GRM2Q14416 872 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 MTF1Q14872 753 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 C10orf120Q5SQS8 335 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 LEKR1Q6ZMV7 388 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 BEND5Q7L4P6 421 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 ST13P5Q8NFI4 369 aaPredicted RBP11.6□□□□□ -0.55
APTX-209ENST00000460940 SH3RF2Q8TEC5 729 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 RNF38Q9H0F5 515 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 SYNCQ9H7C4 482 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 BRD9Q9H8M2 597 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 ABCC13Q9NSE7 274 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 OSER1Q9NX31 292 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 DONSONQ9NYP3 566 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 DNMT3LQ9UJW3 386 aa11.6□□□□□ -0.55
APTX-209ENST00000460940 YJEFN3A6XGL0 299 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 E5RJQ4 531 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 E7ENQ6 273 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 LEFTY2O00292 366 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 MMEP08473 750 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 GDI1P31150 447 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 FMO1Q01740 532 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 ARID5AQ03989 594 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 PDGFRLQ15198 375 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 ASIC2Q16515 512 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 SFMBT2Q5VUG0 894 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 BSPRYQ5W0U4 402 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 BTBD8Q5XKL5 378 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 SPECC1LQ69YQ0 1117 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 CC2D1AQ6P1N0 951 aaPredicted RBP11.59□□□□□ -0.55
APTX-209ENST00000460940 TRIM67Q6ZTA4 783 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 RSRC2Q7L4I2 434 aaKnown RBP11.59□□□□□ -0.55
APTX-209ENST00000460940 PACS2Q86VP3 889 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 ZDHHC17Q8IUH5 632 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 WDTC1Q8N5D0 677 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 MNS1Q8NEH6 495 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 SLC20A1Q8WUM9 679 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 SYN2Q92777 582 aaPredicted RBP11.59□□□□□ -0.55
APTX-209ENST00000460940 ZFRQ96KR1 1074 aaKnown RBP11.59□□□□□ -0.55
APTX-209ENST00000460940 CPXM1Q96SM3 734 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 ASNSD1Q9NWL6 643 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 AIPL1Q9NZN9 384 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 WNT16Q9UBV4 365 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 FBXL21Q9UKT6 434 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 STRIP2Q9ULQ0 834 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 CAPN11Q9UMQ6 739 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 HELZP42694 1942 aaKnown RBP11.59□□□□□ -0.55
APTX-209ENST00000460940 KIF26AQ9ULI4 1882 aaPredicted RBP11.59□□□□□ -0.55
APTX-209ENST00000460940 PAPSS1O43252 624 aaPredicted RBP11.59□□□□□ -0.55
APTX-209ENST00000460940 LTFP02788 710 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 GLI1P08151 1106 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 CHRNB2P17787 502 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 NOMO3P69849 1222 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 GPC5P78333 572 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 ZBED6P86452 979 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 PTPN20Q4JDL3 420 aa11.59□□□□□ -0.55
APTX-209ENST00000460940 PPP1R2P3Q6NXS1 205 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms