RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 CFAP69A5D8W1 941 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 TTC34A8MYJ7 566 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 TMEM233B4DJY2 109 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 H7C4K7 107 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 PRPF4O43172 522 aaKnown RBP eCLIP3.17□□□□□ -1.9
SYPL1-203ENST00000460770 FRS3O43559 492 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 CTNND1O60716 968 aaKnown RBP3.17□□□□□ -1.9
SYPL1-203ENST00000460770 ALDH1L1O75891 902 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 HGFP14210 728 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 BRAFP15056 766 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 ZKSCAN1P17029 563 aaPredicted RBP3.17□□□□□ -1.9
SYPL1-203ENST00000460770 ATF7P17544 494 aaPredicted RBP3.17□□□□□ -1.9
SYPL1-203ENST00000460770 RBL1P28749 1068 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 DGKQP52824 942 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 CACNB3P54284 484 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 GPC5P78333 572 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 PTPROQ16827 1216 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 PRTGQ2VWP7 1150 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 EARS2Q5JPH6 523 aaKnown RBP3.17□□□□□ -1.9
SYPL1-203ENST00000460770 UBAP2Q5T6F2 1119 aaKnown RBP3.17□□□□□ -1.9
SYPL1-203ENST00000460770 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 B3GNT9Q6UX72 402 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 P3H2Q8IVL5 708 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 SDR16C5Q8N3Y7 309 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 SLC44A5Q8NCS7 719 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 PIGKQ92643 395 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 SLC25A28Q96A46 364 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 NMD3Q96D46 503 aaKnown RBP3.17□□□□□ -1.9
SYPL1-203ENST00000460770 ZDHHC12Q96GR4 267 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 LRGUKQ96M69 825 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 NT5C1BQ96P26 610 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 TAAR9Q96RI9 348 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 CTAGE1Q96RT6 745 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 ACO2Q99798 780 aaKnown RBP3.17□□□□□ -1.9
SYPL1-203ENST00000460770 RNF26Q9BY78 433 aaPredicted RBP3.17□□□□□ -1.9
SYPL1-203ENST00000460770 TMEM8AQ9HCN3 771 aa3.17□□□□□ -1.9
SYPL1-203ENST00000460770 PAPOLBQ9NRJ5 636 aaKnown RBP3.17□□□□□ -1.9
SYPL1-203ENST00000460770 C2CD4BA6NLJ0 364 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 RAB27BO00194 218 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 TBX3O15119 743 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 CTIFO43310 598 aaKnown RBP3.16□□□□□ -1.9
SYPL1-203ENST00000460770 TUSC2O75896 110 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 TMEM225BP0DP42 221 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 TFEBP19484 476 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 MCM5P33992 734 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 ITGA8P53708 1063 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 SUMO3P55854 103 aaPredicted RBP3.16□□□□□ -1.9
SYPL1-203ENST00000460770 ANAPC15P60006 121 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 WDR5P61964 334 aaKnown RBP3.16□□□□□ -1.9
SYPL1-203ENST00000460770 KPNB1Q14974 876 aaKnown RBP3.16□□□□□ -1.9
SYPL1-203ENST00000460770 GLE1Q53GS7 698 aaKnown RBP3.16□□□□□ -1.9
SYPL1-203ENST00000460770 ZDHHC24Q6UX98 284 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 NPNTQ6UXI9 565 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 DLK2Q6UY11 383 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 C18orf65Q6ZTR6 163 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 RFX8Q6ZV50 586 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 MICU3Q86XE3 530 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 FSTL5Q8N475 847 aaPredicted RBP3.16□□□□□ -1.9
SYPL1-203ENST00000460770 ZBTB34Q8NCN2 500 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 PMM1Q92871 262 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 FCRL5Q96RD9 977 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 B3GNT5Q9BYG0 378 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 RHOBTB2Q9BYZ6 727 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 TMEM60Q9H2L4 133 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 ZBTB40Q9NUA8 1239 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 TXLNGQ9NUQ3 528 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 IPO11Q9UI26 975 aaKnown RBP3.16□□□□□ -1.9
SYPL1-203ENST00000460770 OGDHLQ9ULD0 1010 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 RIMKLBQ9ULI2 386 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 PROCRQ9UNN8 238 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 ICKQ9UPZ9 632 aa3.16□□□□□ -1.9
SYPL1-203ENST00000460770 SIRT4Q9Y6E7 314 aaPredicted RBP3.16□□□□□ -1.9
SYPL1-203ENST00000460770 PRPF3O43395 683 aaKnown RBP3.15□□□□□ -1.91
SYPL1-203ENST00000460770 RFPL1O75677 317 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 TMIGD3P0DMS9 266 aaPredicted RBP3.15□□□□□ -1.91
SYPL1-203ENST00000460770 TXNP10599 105 aaKnown RBP3.15□□□□□ -1.91
SYPL1-203ENST00000460770 RPS6KB1P23443 525 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 EPHB1P54762 984 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 ZXDBP98169 803 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 HYAL1Q12794 435 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 TTF1Q15361 905 aaPredicted RBP3.15□□□□□ -1.91
SYPL1-203ENST00000460770 CNGA2Q16280 664 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 CNGA3Q16281 694 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 CLEC9AQ6UXN8 241 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 KCTD20Q7Z5Y7 419 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.15□□□□□ -1.91
SYPL1-203ENST00000460770 C11orf44Q8N8P7 122 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 PPP1R35Q8TAP8 253 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 KAT2BQ92831 832 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 NTPCRQ9BSD7 190 aaKnown RBP3.15□□□□□ -1.91
SYPL1-203ENST00000460770 HTATIP2Q9BUP3 242 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 SCNM1Q9BWG6 230 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 LRRC27Q9C0I9 530 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 SLCO5A1Q9H2Y9 848 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 FZD3Q9NPG1 666 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 ITGB1BP2Q9UKP3 347 aa3.15□□□□□ -1.91
SYPL1-203ENST00000460770 TTBK1Q5TCY1 1321 aaPredicted RBP3.15□□□□□ -1.91
SYPL1-203ENST00000460770 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.14□□□□□ -1.91
SYPL1-203ENST00000460770 SPTLC2O15270 562 aa3.14□□□□□ -1.91
SYPL1-203ENST00000460770 TLX3O43711 291 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms