RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 HPS6Q86YV9 775 aa16.05■□□□□ 0.16
SSR4-206ENST00000460616 ALDH16A1Q8IZ83 802 aa16.05■□□□□ 0.16
SSR4-206ENST00000460616 THAP1Q9NVV9 213 aa16.05■□□□□ 0.16
SSR4-206ENST00000460616 ITGA11Q9UKX5 1188 aa16.05■□□□□ 0.16
SSR4-206ENST00000460616 H3BNX3 289 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 RFPL1O75677 317 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 BPGMP07738 259 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 NPTX2P47972 431 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 SERPINB8P50452 374 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 EMP3P54852 163 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 BTKQ06187 659 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 PIGHQ14442 188 aaPredicted RBP16.04■□□□□ 0.16
SSR4-206ENST00000460616 SLC39A4Q6P5W5 647 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 C15orf39Q6ZRI6 1047 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 ZCCHC23Q6ZST2 131 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 KBTBD6Q86V97 674 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 GPD1LQ8N335 351 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 CCDC33Q8N5R6 958 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 DIS3LQ8TF46 1054 aaKnown RBP16.04■□□□□ 0.16
SSR4-206ENST00000460616 CFAP36Q96G28 342 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 NLRP4Q96MN2 994 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 MXRA8Q9BRK3 442 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 FRMD8P1Q9BZ68 369 aaPredicted RBP16.04■□□□□ 0.16
SSR4-206ENST00000460616 PLK2Q9NYY3 685 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 A0A0B4J269 797 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 C3orf70A6NLC5 250 aaPredicted RBP16.04■□□□□ 0.16
SSR4-206ENST00000460616 AVILO75366 819 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 USP2O75604 605 aaPredicted RBP16.04■□□□□ 0.16
SSR4-206ENST00000460616 HLA-DRAP01903 254 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 MAGEA10P43363 369 aaPredicted RBP16.04■□□□□ 0.16
SSR4-206ENST00000460616 TUBB3Q13509 450 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 SYCP2LQ5T4T6 812 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 DNAJC24Q6P3W2 148 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 DEFB107AQ8IZN7 70 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 FBXW8Q8N3Y1 598 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 EFCAB3Q8N7B9 438 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 PPP1R14CQ8TAE6 165 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 SNRNP27Q8WVK2 155 aaKnown RBP16.04■□□□□ 0.16
SSR4-206ENST00000460616 DCUN1D1Q96GG9 259 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 ZNF341Q9BYN7 854 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 SHCBP1LQ9BZQ2 653 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 ZNF408Q9H9D4 720 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 XAB2Q9HCS7 855 aaKnown RBP16.04■□□□□ 0.16
SSR4-206ENST00000460616 PCDHGB4Q9UN71 923 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 PCDHGB5Q9Y5G0 923 aa16.04■□□□□ 0.16
SSR4-206ENST00000460616 BIRC5O15392 142 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 TNFAIP8O95379 198 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 ITGB5P18084 799 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 TNNI1P19237 187 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 PCSK6P29122 969 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 CUL2Q13617 745 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 CNGA3Q16281 694 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 DCAF15Q66K64 600 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 ACER1Q8TDN7 264 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 KLRG1Q96E93 195 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 SIKE1Q9BRV8 207 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 SENP6Q9GZR1 1112 aaPredicted RBP16.03■□□□□ 0.16
SSR4-206ENST00000460616 EFR3BQ9Y2G0 817 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 CXorf49A8MYA2 514 aaPredicted RBP16.03■□□□□ 0.16
SSR4-206ENST00000460616 SIN3BO75182 1162 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 SF3B1O75533 1304 aaKnown RBP eCLIP16.03■□□□□ 0.16
SSR4-206ENST00000460616 TRMUO75648 421 aaKnown RBP16.03■□□□□ 0.16
SSR4-206ENST00000460616 COG7P83436 770 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 DMP1Q13316 513 aaPredicted RBP16.03■□□□□ 0.16
SSR4-206ENST00000460616 DGKZQ13574 1117 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 SUPT20HL1Q3ZLR7 823 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 ZNF513Q8N8E2 541 aaPredicted RBP16.03■□□□□ 0.16
SSR4-206ENST00000460616 PIWIL2Q8TC59 973 aaKnown RBP16.03■□□□□ 0.16
SSR4-206ENST00000460616 CMTM5Q96DZ9 223 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 PNPLA8Q9NP80 782 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 KMT5AQ9NQR1 393 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 KCNH7Q9NS40 1196 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 ZNF180Q9UJW8 692 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 APPL1Q9UKG1 709 aa16.03■□□□□ 0.16
SSR4-206ENST00000460616 MAGEB3O15480 346 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 TOM1L1O75674 476 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 CALB1P05937 261 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 SRGAP2CP0DJJ0 459 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 SRGAP2BP0DMP2 458 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 STAT2P52630 851 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 NRLP54845 237 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 HDAC4P56524 1084 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 TMEM62Q0P6H9 643 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 BMPR2Q13873 1038 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 ZYXQ15942 572 aaKnown RBP16.02■□□□□ 0.16
SSR4-206ENST00000460616 SMTNL2Q2TAL5 461 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 IYDQ6PHW0 289 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 BBS12Q6ZW61 710 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 ARCQ7LC44 396 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 LDHDQ86WU2 507 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 NDUFAF2Q8N183 169 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 PRPF31Q8WWY3 499 aaKnown RBP16.02■□□□□ 0.16
SSR4-206ENST00000460616 ZNF606Q8WXB4 792 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 GFM2Q969S9 779 aaKnown RBP16.02■□□□□ 0.16
SSR4-206ENST00000460616 CNBD2Q96M20 576 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 RAB26Q9ULW5 256 aa16.02■□□□□ 0.16
SSR4-206ENST00000460616 LOC100653049A0A140TA62 436 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 SPDYE16A6NNV3 312 aaPredicted RBP16.02■□□□□ 0.15
SSR4-206ENST00000460616 ADCY3O60266 1144 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 KRT34O76011 436 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms