RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 AFPP02771 609 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 CD3EP07766 207 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 JMJD7P0C870 316 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 MYF5P13349 255 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 TRIM27P14373 513 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 IFNGR1P15260 489 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 CPEP16870 476 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 ITGB5P18084 799 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 ELAVL4P26378 380 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 ECI1P42126 302 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 PTGER3P43115 390 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 NOP2P46087 812 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 GPC3P51654 580 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 UCNP55089 124 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 TMPRSS3P57727 454 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 GPR85P60893 370 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 DSC1Q08554 894 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 FCHO2Q0JRZ9 810 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 NFATC3Q12968 1075 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 KCNAB2Q13303 367 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 DMC1Q14565 340 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 PSMD5Q16401 504 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 CPSF6Q16630 551 aaKnown RBP eCLIP4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 NKPD1Q17RQ9 610 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 DPY19L1Q2PZI1 675 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 FBXO43Q4G163 708 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 ARHGAP29Q52LW3 1261 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 TMEM196Q5HYL7 178 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 PRSS36Q5K4E3 855 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 SPDYCQ5MJ68 293 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 CYP4A22Q5TCH4 519 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 BROXQ5VW32 411 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 RNF219Q5W0B1 726 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 EEF1DP3Q658K8 133 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 CDCA2Q69YH5 1023 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 EFCAB12Q6NXP0 572 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 USP53Q70EK8 1073 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 PDZD4Q76G19 769 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 ZNF765Q7L2R6 523 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 THAP5Q7Z6K1 395 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 DGKHQ86XP1 1220 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 SPACA3Q8IXA5 215 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 SHISA5Q8N114 240 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 OR2I1PQ8NGU4 316 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 TTC8Q8TAM2 541 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 SMARCC2Q8TAQ2 1214 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 CUL5Q93034 780 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 ZNF668Q96K58 619 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 TBC1D32Q96NH3 1257 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 CLSTN3Q9BQT9 956 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 TTPALQ9BTX7 342 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 GCOM2Q9BZD3 368 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 TPSD1Q9BZJ3 242 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 INO80BQ9C086 356 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 GPR88Q9GZN0 384 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 SLITRK6Q9H5Y7 841 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 KAT14Q9H8E8 782 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 FSCN3Q9NQT6 498 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 POLR3BQ9NW08 1133 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 GTSE1Q9NYZ3 720 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 HSPBP1Q9NZL4 362 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 TMEFF2Q9UIK5 374 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 PILRBQ9UKJ0 227 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 ADAM28Q9UKQ2 775 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 PCDHB2Q9Y5E7 798 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 NBPF19A0A087WUL8 3843 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 NFASCO94856 1347 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 ZMYM6O95789 1325 aa4.46□□□□□ -1.7
ECHDC1-211ENST00000460558 IGKV6D-21A0A0A0MT36 114 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 F8W810 466 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 CBX4O00257 560 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 FGF10O15520 208 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 CBFA2T3O75081 653 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 TADA2AO75478 443 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 CSDE1O75534 798 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 GJB3O75712 270 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 F13BP05160 661 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 CKMP06732 381 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 ATXN1LP0C7T5 689 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 HNF1BP35680 557 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 FLT3P36888 993 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 MECP2P51608 486 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 CLCN7P51798 805 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 CDC42EP1Q00587 391 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 INSM1Q01101 510 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 SPIRE1Q08AE8 756 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 CCDC173Q0VFZ6 552 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 STAT4Q14765 748 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 SMAD1Q15797 465 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 ITPRIPL2Q3MIP1 535 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 CCDC178Q5BJE1 867 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 ARHGAP40Q5TG30 622 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 WWC2Q6AWC2 1192 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 IQCEQ6IPM2 695 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 ANO7Q6IWH7 933 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 FSTL4Q6MZW2 842 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 LHFPL2Q6ZUX7 228 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 CEP57Q86XR8 500 aa4.45□□□□□ -1.7
ECHDC1-211ENST00000460558 ELMOD1Q8N336 334 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms