RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 WNK4Q96J92 1243 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 FAR2Q96K12 515 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 VTA1Q9NP79 307 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 PKD2L2Q9NZM6 624 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 LOC102724159A0A0B4J2E5 919 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 LIASO43766 372 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 AMPD1P23109 780 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 SERPINB5P36952 375 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 FAAP100Q0VG06 881 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 PWP2Q15269 919 aaKnown RBP15.22■□□□□ 0.03
PTPRU-205ENST00000460170 ATP13A4Q4VNC1 1196 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 PAN2Q504Q3 1202 aaKnown RBP15.22■□□□□ 0.03
PTPRU-205ENST00000460170 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.22■□□□□ 0.03
PTPRU-205ENST00000460170 ZSWIM2Q8NEG5 633 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 NKX2-3Q8TAU0 364 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 PCDHGB4Q9UN71 923 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 CHRM3P20309 590 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 ADRA1DP25100 572 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 GP5P40197 560 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 NOMO3P69849 1222 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 ADIGQ0VDE8 80 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 UGCGQ16739 394 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 PACS2Q86VP3 889 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 BLOC1S5Q8TDH9 187 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 RUBCNLQ9H714 662 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 RIC8BQ9NVN3 520 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 KIF17Q9P2E2 1029 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 STRNO43815 780 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 SNX3O60493 162 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 PTPN7P35236 360 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 SYT15Q9BQS2 421 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 C10orf88Q9H8K7 445 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 DDX43Q9NXZ2 648 aaKnown RBP15.21■□□□□ 0.03
PTPRU-205ENST00000460170 SAE1Q9UBE0 346 aaPredicted RBP15.21■□□□□ 0.03
PTPRU-205ENST00000460170 PKP3Q9Y446 797 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 OPLAHO14841 1288 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 AKAP5P24588 427 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 N4BP2L1Q5TBK1 243 aaPredicted RBP15.21■□□□□ 0.03
PTPRU-205ENST00000460170 KCNT2Q6UVM3 1135 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 SZRD1Q7Z422 152 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 MIB1Q86YT6 1006 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 ZNF384Q8TF68 577 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 CEP41Q9BYV8 373 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.21■□□□□ 0.03
PTPRU-205ENST00000460170 FZD1Q9UP38 647 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 ACTL7BQ9Y614 415 aa15.21■□□□□ 0.03
PTPRU-205ENST00000460170 MAGEB16A2A368 324 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 ENO4A6NNW6 628 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 HSPA1AP0DMV8 641 aaKnown RBP15.21■□□□□ 0.02
PTPRU-205ENST00000460170 HSPA1BP0DMV9 641 aaKnown RBP15.21■□□□□ 0.02
PTPRU-205ENST00000460170 RBL1P28749 1068 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 IFNA8P32881 189 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 KCNK10P57789 538 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 DSG1Q02413 1049 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 SLC30A9Q6PML9 568 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 ZNF410Q86VK4 478 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 RIOX2Q8IUF8 465 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 RASGEF1CQ8N431 466 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 DACT3Q96B18 629 aaPredicted RBP15.21■□□□□ 0.02
PTPRU-205ENST00000460170 MFSD14AQ96MC6 490 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 GPR63Q9BZJ6 419 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 IL1RL2Q9HB29 575 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 GGA2Q9UJY4 613 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 VPS9D1Q9Y2B5 631 aa15.21■□□□□ 0.02
PTPRU-205ENST00000460170 FAM208AQ9UK61 1670 aaKnown RBP15.21■□□□□ 0.02
PTPRU-205ENST00000460170 SLCO1B7G3V0H7 640 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 FCHO1O14526 889 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 DPYSL4O14531 572 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 DDNO94850 711 aaPredicted RBP15.2■□□□□ 0.02
PTPRU-205ENST00000460170 ETS1P14921 441 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 MFN1Q8IWA4 741 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 FUKQ8N0W3 1084 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 OR5B17Q8NGF7 314 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 AFDNP55196 1824 aaKnown RBP15.2■□□□□ 0.02
PTPRU-205ENST00000460170 STX7O15400 261 aaKnown RBP15.2■□□□□ 0.02
PTPRU-205ENST00000460170 SOAT2O75908 522 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 CAPSQ13938 189 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 MTFR1Q15390 333 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 ZRANB3Q5FWF4 1079 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 C16orf87Q6PH81 154 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 LRRC39Q96DD0 335 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 UBP1Q9NZI7 540 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 ZNF212Q9UDV6 495 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 MED1Q15648 1581 aaPredicted RBP15.2■□□□□ 0.02
PTPRU-205ENST00000460170 ACAT1P24752 427 aaKnown RBP15.2■□□□□ 0.02
PTPRU-205ENST00000460170 EPHX2P34913 555 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 AASDHQ4L235 1098 aaPredicted RBP15.2■□□□□ 0.02
PTPRU-205ENST00000460170 DEFB106AQ8N104 65 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 SLC2A14Q8TDB8 520 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 GLT1D1Q96MS3 346 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 FICDQ9BVA6 458 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 RRN3Q9NYV6 651 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 DSEQ9UL01 958 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 ADGRA2Q96PE1 1338 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 MAGEA13PA6NCF6 341 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 MAFO75444 373 aaPredicted RBP15.2■□□□□ 0.02
PTPRU-205ENST00000460170 KPNB1Q14974 876 aaKnown RBP15.2■□□□□ 0.02
PTPRU-205ENST00000460170 THEMIS2Q5TEJ8 643 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 DNAJB3Q8WWF6 145 aa15.2■□□□□ 0.02
PTPRU-205ENST00000460170 TNFSF13BQ9Y275 285 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms