RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 PARVAQ9NVD7 372 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 MKS1Q9NXB0 559 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 DDX56Q9NY93 547 aaKnown RBP10.8□□□□□ -0.68
USP39-210ENST00000459775 NUDT5Q9UKK9 219 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 PLXNA4Q9HCM2 1894 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 TMEM191CA6NGB0 347 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 TNFRSF10BO14763 440 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 SRGAP2O75044 1071 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 RNASEH2AO75792 299 aaKnown RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 CXCR5P32302 372 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 MARCKSL1P49006 195 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 SLC5A3P53794 718 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 SLC8A3P57103 927 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 SIM2Q14190 667 aaPredicted RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 LLGL1Q15334 1064 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 NFE2Q16621 373 aaPredicted RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 C15orf59Q2T9L4 293 aaPredicted RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 DCUN1D2Q6PH85 259 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 SIX6OS1Q8N1H7 587 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 CCDC89Q8N998 374 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 C3orf20Q8ND61 904 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 ZNF461Q8TAF7 563 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 UHMK1Q8TAS1 419 aaKnown RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 EDEM1Q92611 657 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 FAM149B1Q96BN6 582 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 ACSF2Q96CM8 615 aaPredicted RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 VCPIP1Q96JH7 1222 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 CFAP57Q96MR6 1250 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 TGS1Q96RS0 853 aaKnown RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 SELENOOQ9BVL4 669 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 C5orf42Q9H799 3197 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 GBF1Q92538 1859 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 A0A0A6YYK5 440 aaPredicted RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 GOLGA6L9A6NEM1 432 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 C2orf71A6NGG8 1288 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 BTNL10A8MVZ5 291 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 BOLA2-SMG1P6H3BVE0 249 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 IFRD1O00458 451 aaPredicted RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 TGM5O43548 720 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 ABLIM3O94929 683 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 FYNP06241 537 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 MYBL1P10243 752 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 HAPLN1P10915 354 aaPredicted RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 COMTP21964 271 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 RPL34P49207 117 aaKnown RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 ATXN1P54253 815 aaKnown RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 ERVK-21P61565 698 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 ATP11AP98196 1134 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 SLC6A3Q01959 620 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 GPM6BQ13491 265 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 ZNF268Q14587 947 aaPredicted RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 CDO1Q16878 200 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 SYPL2Q5VXT5 272 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 BHLHA9Q7RTU4 235 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 ADGRD2Q7Z7M1 963 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 ARFGAP1Q8N6T3 406 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 MRPL43Q8N983 215 aaKnown RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 ADAM32Q8TC27 787 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 STK32AQ8WU08 396 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 ERP27Q96DN0 273 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 HSFY1Q96LI6 401 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 KLHL5Q96PQ7 755 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 DNAI2Q9GZS0 605 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 TLR9Q9NR96 1032 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 DCAF16Q9NXF7 216 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 TMEM59LQ9UK28 342 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 MAGED2Q9UNF1 606 aaPredicted RBP10.79□□□□□ -0.68
USP39-210ENST00000459775 ALG6Q9Y672 507 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 NLRC5Q86WI3 1866 aa10.79□□□□□ -0.68
USP39-210ENST00000459775 SYNJ2BP-COX16A0A087WUM0 186 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 SIGLEC16A6NMB1 481 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 ATF2P15336 505 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 GTF2F1P35269 517 aaKnown RBP eCLIP10.78□□□□□ -0.68
USP39-210ENST00000459775 IRX1P78414 480 aaPredicted RBP10.78□□□□□ -0.68
USP39-210ENST00000459775 SLC7A5Q01650 507 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 RAB33AQ14088 237 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 KCTD19Q17RG1 926 aaPredicted RBP10.78□□□□□ -0.68
USP39-210ENST00000459775 RAB41Q5JT25 222 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 TXNRD3NBQ6F5E7 133 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 CCDC91Q7Z6B0 441 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 RHOT2Q8IXI1 618 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 PAF1Q8N7H5 531 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 RXFP2Q8WXD0 754 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 KCTD13Q8WZ19 329 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 KRT35Q92764 455 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 PBXIP1Q96AQ6 731 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 MAGEB5Q9BZ81 275 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 OSER1Q9NX31 292 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 COX16Q9P0S2 106 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 NAALADL1Q9UQQ1 740 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 C5orf67F2Z3F1 127 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 MYO1FO00160 1098 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 PRRG1O14668 218 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 ZNF185O15231 689 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 ZBED1O96006 694 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 MSL3P1P0C860 447 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 PDGFRAP16234 1089 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 KLRC2P26717 231 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 GJC1P36383 396 aa10.78□□□□□ -0.68
USP39-210ENST00000459775 DAOAP59103 153 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms