RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SRPK1Q96SB4 655 aaKnown RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 EBNA1BP2Q99848 306 aaKnown RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 SNRNP25Q9BV90 132 aaKnown RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 NRDE2Q9H7Z3 1164 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 MINDY3Q9H8M7 445 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 ELP3Q9H9T3 547 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 KIF9Q9HAQ2 790 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 USP29Q9HBJ7 922 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 SLCO1B3Q9NPD5 702 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 MID2Q9UJV3 735 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 STAP1Q9ULZ2 295 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 PLLPQ9Y342 182 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 TTLL3Q9Y4R7 772 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 PCDHA11Q9Y5I1 949 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 OTOFQ9HC10 1997 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 RALGAPA2Q2PPJ7 1873 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 A0A0A0MRY4 1105 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 FAM159BA6NKW6 160 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 TRIM49D1C9J1S8 452 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 H3BRB1 525 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 NCAM2O15394 837 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 GLRA3O75311 464 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 H2AFYO75367 372 aaKnown RBP9.16□□□□□ -0.94
HDAC3-202ENST00000459727 PGK2P07205 417 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 APRTP07741 180 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 CD48P09326 243 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 PYGBP11216 843 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 CYP3A5P20815 502 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 DNAJB2P25686 324 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 TARSP26639 723 aaKnown RBP9.16□□□□□ -0.94
HDAC3-202ENST00000459727 GCKP35557 465 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 FAAP100Q0VG06 881 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 PRKG1Q13976 671 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 FRG1Q14331 258 aaKnown RBP9.16□□□□□ -0.94
HDAC3-202ENST00000459727 GRIK4Q16099 956 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 DGKDQ16760 1214 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 INSCQ1MX18 579 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 ZNF792Q3KQV3 632 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 SCYL2Q6P3W7 929 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 C1orf228Q6PIY5 440 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 MAMDC4Q6UXC1 1216 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 CYP4V2Q6ZWL3 525 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-202ENST00000459727 USP50Q70EL3 339 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-202ENST00000459727 MARK2Q7KZI7 788 aaKnown RBP9.16□□□□□ -0.94
HDAC3-202ENST00000459727 CRLF3Q8IUI8 442 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.16□□□□□ -0.94
HDAC3-202ENST00000459727 CRYBG2Q8N1P7 616 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 KIF2BQ8N4N8 673 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 PPM1NQ8N819 430 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 UBA3Q8TBC4 463 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 TFB1MQ8WVM0 346 aaKnown RBP9.16□□□□□ -0.94
HDAC3-202ENST00000459727 TRAPPC12Q8WVT3 735 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 STMN2Q93045 179 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 MCUR1Q96AQ8 359 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 SKA1Q96BD8 255 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 STAMBPL1Q96FJ0 436 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 SPATA13Q96N96 652 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 SLC9A7Q96T83 725 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 WDR83Q9BRX9 315 aaKnown RBP9.16□□□□□ -0.94
HDAC3-202ENST00000459727 BTBD10Q9BSF8 475 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 TBC1D10AQ9BXI6 508 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 RNPEPQ9H4A4 650 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 TUT1Q9H6E5 874 aaKnown RBP9.16□□□□□ -0.94
HDAC3-202ENST00000459727 GDAP2Q9NXN4 497 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 SIRPGQ9P1W8 387 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 CNTN3Q9P232 1028 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 SAE1Q9UBE0 346 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-202ENST00000459727 HMGXB4Q9UGU5 601 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 GGT7Q9UJ14 662 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 GRID1Q9ULK0 1009 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 AP4E1Q9UPM8 1137 aa9.16□□□□□ -0.94
HDAC3-202ENST00000459727 DICER1Q9UPY3 1922 aaKnown RBP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 ANK1P16157 1881 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 SMIM35A0A1B0GVV1 85 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 SLC15A5A6NIM6 579 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 ERI2A8K979 691 aaKnown RBP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 XPO1O14980 1071 aaKnown RBP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 GYG2O15488 501 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 DAB1O75553 588 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 FBXO21O94952 628 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 PFKMP08237 780 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 IQCF3P0C7M6 154 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 ESRRAP11474 423 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 GRK2P25098 689 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 RBL1P28749 1068 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 HADHAP40939 763 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 HK2P52789 917 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 IGBP1P78318 339 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 EFTUD2Q15029 972 aaKnown RBP eCLIP9.15□□□□□ -0.947e-11■■■□□ 17.5
HDAC3-202ENST00000459727 PDK1Q15118 436 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 CDO1Q16878 200 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 FBXO47Q5MNV8 452 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 ANKRD20A2Q5SQ80 823 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 ANKRD20A1Q5TYW2 823 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 ARMC3Q5W041 872 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 MAP1SQ66K74 1059 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-202ENST00000459727 STEAP4Q687X5 459 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 IQSEC1Q6DN90 963 aa9.15□□□□□ -0.94
HDAC3-202ENST00000459727 SH2D5Q6ZV89 423 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms