RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 DAOAP59103 153 aa24.27■■□□□ 1.48
CBX3-204ENST00000456948 RAPGEF1Q13905 1077 aa24.27■■□□□ 1.48
CBX3-204ENST00000456948 ANO4Q32M45 955 aa24.27■■□□□ 1.48
CBX3-204ENST00000456948 KLHDC7AQ5VTJ3 777 aa24.27■■□□□ 1.48
CBX3-204ENST00000456948 FSTL4Q6MZW2 842 aa24.27■■□□□ 1.48
CBX3-204ENST00000456948 ATRIPQ8WXE1 791 aa24.27■■□□□ 1.48
CBX3-204ENST00000456948 LSM14BQ9BX40 385 aaKnown RBP24.27■■□□□ 1.48
CBX3-204ENST00000456948 PDCL3Q9H2J4 239 aa24.27■■□□□ 1.48
CBX3-204ENST00000456948 SIX2Q9NPC8 291 aa24.27■■□□□ 1.48
CBX3-204ENST00000456948 SPHK2Q9NRA0 654 aa24.27■■□□□ 1.48
CBX3-204ENST00000456948 RBM12Q9NTZ6 932 aaKnown RBP24.27■■□□□ 1.48
CBX3-204ENST00000456948 WDR35Q9P2L0 1181 aa24.27■■□□□ 1.48
CBX3-204ENST00000456948 MDM4O15151 490 aa24.26■■□□□ 1.47
CBX3-204ENST00000456948 CHKAP35790 457 aa24.26■■□□□ 1.47
CBX3-204ENST00000456948 KLHL40Q2TBA0 621 aa24.26■■□□□ 1.47
CBX3-204ENST00000456948 LY6G5CQ5SRR4 150 aa24.26■■□□□ 1.47
CBX3-204ENST00000456948 CHFRQ96EP1 664 aa24.26■■□□□ 1.47
CBX3-204ENST00000456948 PCMTD1Q96MG8 357 aaPredicted RBP24.26■■□□□ 1.47
CBX3-204ENST00000456948 XPO6Q96QU8 1125 aaKnown RBP24.26■■□□□ 1.47
CBX3-204ENST00000456948 PNKPQ96T60 521 aa24.26■■□□□ 1.47
CBX3-204ENST00000456948 PLCB1Q9NQ66 1216 aa24.26■■□□□ 1.47
CBX3-204ENST00000456948 PRMT8Q9NR22 394 aaPredicted RBP24.26■■□□□ 1.47
CBX3-204ENST00000456948 HBS1LQ9Y450 684 aaKnown RBP24.26■■□□□ 1.47
CBX3-204ENST00000456948 SLC12A8A0AV02 714 aa24.25■■□□□ 1.47
CBX3-204ENST00000456948 YJEFN3A6XGL0 299 aa24.25■■□□□ 1.47
CBX3-204ENST00000456948 BECN2A8MW95 431 aa24.25■■□□□ 1.47
CBX3-204ENST00000456948 E7ENQ6 273 aa24.25■■□□□ 1.47
CBX3-204ENST00000456948 FOXN3O00409 490 aaPredicted RBP24.25■■□□□ 1.47
CBX3-204ENST00000456948 CALCAP01258 141 aa24.25■■□□□ 1.47
CBX3-204ENST00000456948 APODP05090 189 aa24.25■■□□□ 1.47
CBX3-204ENST00000456948 HARS2P49590 506 aaKnown RBP24.25■■□□□ 1.47
CBX3-204ENST00000456948 APBA1Q02410 837 aa24.25■■□□□ 1.47
CBX3-204ENST00000456948 KCNMA1Q12791 1236 aa24.25■■□□□ 1.47
CBX3-204ENST00000456948 DRAP1Q14919 205 aaPredicted RBP24.25■■□□□ 1.47
CBX3-204ENST00000456948 ANO6Q4KMQ2 910 aa24.25■■□□□ 1.47
CBX3-204ENST00000456948 NKD2Q969F2 451 aaPredicted RBP24.25■■□□□ 1.47
CBX3-204ENST00000456948 PLD4Q96BZ4 506 aa24.25■■□□□ 1.47
CBX3-204ENST00000456948 BPIFA3Q9BQP9 254 aa24.25■■□□□ 1.47
CBX3-204ENST00000456948 MIS12Q9H081 205 aa24.25■■□□□ 1.47
CBX3-204ENST00000456948 ZSCAN32Q9NX65 697 aa24.25■■□□□ 1.47
CBX3-204ENST00000456948 LIMA1Q9UHB6 759 aaKnown RBP24.25■■□□□ 1.47
CBX3-204ENST00000456948 PROB1E7EW31 1015 aa24.24■■□□□ 1.47
CBX3-204ENST00000456948 STC2O76061 302 aa24.24■■□□□ 1.47
CBX3-204ENST00000456948 EGFP01133 1207 aa24.24■■□□□ 1.47
CBX3-204ENST00000456948 LTFP02788 710 aa24.24■■□□□ 1.47
CBX3-204ENST00000456948 UCHL3P15374 230 aa24.24■■□□□ 1.47
CBX3-204ENST00000456948 DENND1BQ6P3S1 775 aa24.24■■□□□ 1.47
CBX3-204ENST00000456948 FAM71AQ8IYT1 594 aa24.24■■□□□ 1.47
CBX3-204ENST00000456948 NDRG1Q92597 394 aaKnown RBP24.24■■□□□ 1.47
CBX3-204ENST00000456948 STK33Q9BYT3 514 aa24.24■■□□□ 1.47
CBX3-204ENST00000456948 LHX5Q9H2C1 402 aa24.24■■□□□ 1.47
CBX3-204ENST00000456948 DEC1Q9P2X7 70 aa24.24■■□□□ 1.47
CBX3-204ENST00000456948 PCDHGC3Q9UN70 934 aa24.24■■□□□ 1.47
CBX3-204ENST00000456948 PCDHGA2Q9Y5H1 932 aa24.24■■□□□ 1.47
CBX3-204ENST00000456948 PIK3R2O00459 728 aa24.23■■□□□ 1.47
CBX3-204ENST00000456948 CAPN9O14815 690 aa24.23■■□□□ 1.47
CBX3-204ENST00000456948 HOXC11O43248 304 aaPredicted RBP24.23■■□□□ 1.47
CBX3-204ENST00000456948 HMBSP08397 361 aa24.23■■□□□ 1.47
CBX3-204ENST00000456948 RPL34P49207 117 aaKnown RBP24.23■■□□□ 1.47
CBX3-204ENST00000456948 COPB1P53618 953 aaKnown RBP24.23■■□□□ 1.47
CBX3-204ENST00000456948 SKOR2Q2VWA4 1001 aaPredicted RBP24.23■■□□□ 1.47
CBX3-204ENST00000456948 FMNL3Q8IVF7 1028 aa24.23■■□□□ 1.47
CBX3-204ENST00000456948 SCUBE3Q8IX30 993 aa24.23■■□□□ 1.47
CBX3-204ENST00000456948 MAML2Q8IZL2 1156 aaPredicted RBP24.23■■□□□ 1.47
CBX3-204ENST00000456948 AOPEPQ8N6M6 819 aa24.23■■□□□ 1.47
CBX3-204ENST00000456948 EDEM1Q92611 657 aa24.23■■□□□ 1.47
CBX3-204ENST00000456948 ACDQ96AP0 544 aa24.23■■□□□ 1.47
CBX3-204ENST00000456948 FAM149B1Q96BN6 582 aa24.23■■□□□ 1.47
CBX3-204ENST00000456948 BBS2Q9BXC9 721 aa24.23■■□□□ 1.47
CBX3-204ENST00000456948 SLC4A5Q9BY07 1137 aa24.23■■□□□ 1.47
CBX3-204ENST00000456948 SLC8A2Q9UPR5 921 aa24.23■■□□□ 1.47
CBX3-204ENST00000456948 LRRC10BA6NIK2 292 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 CHURC1-FNTBB4DL54 471 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 RNF40O75150 1001 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 PAPSS2O95340 614 aaPredicted RBP24.22■■□□□ 1.47
CBX3-204ENST00000456948 CYBBP04839 570 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 CORO1AP31146 461 aaKnown RBP24.22■■□□□ 1.47
CBX3-204ENST00000456948 OPRD1P41143 372 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 GRIA2P42262 883 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 UBXN1Q04323 297 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 Q6ZS52 159 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 ASCL5Q7RTU5 278 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 TMEM110Q86TL2 294 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 TMEM25Q86YD3 366 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 SYNCQ9H7C4 482 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 FBRSL1Q9HCM7 1045 aaKnown RBP24.22■■□□□ 1.47
CBX3-204ENST00000456948 ACP6Q9NPH0 428 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 ARHGEF4Q9NR80 690 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 FHOD1Q9Y613 1164 aa24.22■■□□□ 1.47
CBX3-204ENST00000456948 NCAM1P13591 858 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 CLCN1P35523 988 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 ZNF165P49910 485 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 TPM4P67936 248 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 SATB1Q01826 763 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 PDCLQ13371 301 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 GAS6Q14393 721 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 FILIP1LQ4L180 1135 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 Q6ZNB5 142 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 TPGS1Q6ZTW0 290 aa24.21■■□□□ 1.47
CBX3-204ENST00000456948 BHLHA9Q7RTU4 235 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms