RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 USP8P40818 1118 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 SIM2Q14190 667 aaPredicted RBP17■□□□□ 0.31
CPSF6-203ENST00000456847 ARHGAP44Q17R89 818 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 EXOC3L4Q17RC7 722 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 PREPLQ4J6C6 727 aaPredicted RBP17■□□□□ 0.31
CPSF6-203ENST00000456847 PKDCCQ504Y2 493 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 PM20D1Q6GTS8 502 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 GJB7Q6PEY0 223 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 CEP68Q76N32 757 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 WDR5BQ86VZ2 330 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 IRF2BP1Q8IU81 584 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 ZSWIM1Q9BR11 485 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 BBS2Q9BXC9 721 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 CNGB3Q9NQW8 809 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 OLA1Q9NTK5 396 aaKnown RBP17■□□□□ 0.31
CPSF6-203ENST00000456847 GMEB2Q9UKD1 530 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 PES1O00541 588 aaKnown RBP17■□□□□ 0.31
CPSF6-203ENST00000456847 GREM1O60565 184 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 CORO1AP31146 461 aaKnown RBP17■□□□□ 0.31
CPSF6-203ENST00000456847 HOXA6P31267 233 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 CNR2P34972 360 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 GRIA2P42262 883 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 SRSF5Q13243 272 aaKnown RBP17■□□□□ 0.31
CPSF6-203ENST00000456847 SYT13Q7L8C5 426 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 USP33Q8TEY7 942 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 XPO6Q96QU8 1125 aaKnown RBP17■□□□□ 0.31
CPSF6-203ENST00000456847 DCLK3Q9C098 648 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 DEC1Q9P2X7 70 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 APEX2Q9UBZ4 518 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 ZNF510Q9Y2H8 683 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 THAP12O43422 761 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 MED7O43513 233 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 TULP3O75386 442 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 GRAMD4Q6IC98 578 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 NUDT18Q6ZVK8 323 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 BHLHA9Q7RTU4 235 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 DCLK2Q8N568 766 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 CCDC33Q8N5R6 958 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 CAMKK1Q8N5S9 505 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 GPT2Q8TD30 523 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 SLC35F5Q8WV83 523 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 EDEM1Q92611 657 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 GOLGA1Q92805 767 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 DNAJC17Q9NVM6 304 aaKnown RBP16.99■□□□□ 0.31
CPSF6-203ENST00000456847 WDR35Q9P2L0 1181 aa16.99■□□□□ 0.31
CPSF6-203ENST00000456847 EML5Q05BV3 1969 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 GTPBP10A4D1E9 387 aaKnown RBP16.98■□□□□ 0.31
CPSF6-203ENST00000456847 TBC1D3BA6NDS4 549 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 YJEFN3A6XGL0 299 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 E7ENQ6 273 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 LETM1O95202 739 aaPredicted RBP16.98■□□□□ 0.31
CPSF6-203ENST00000456847 APBB3O95704 486 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 TYRP14679 529 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 GNA15P30679 374 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 TIE1P35590 1138 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 DAOAP59103 153 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 MRPS21P82921 87 aaKnown RBP16.98■□□□□ 0.31
CPSF6-203ENST00000456847 MESP2Q0VG99 397 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 BSPRYQ5W0U4 402 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 PMF1Q6P1K2 205 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 Q6ZNB5 142 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.98■□□□□ 0.31
CPSF6-203ENST00000456847 SFTPA1Q8IWL2 248 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 ETFBKMTQ8IXQ9 262 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 BHMTQ93088 406 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 ST7Q9NRC1 585 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 ABCC13Q9NSE7 274 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 CNTN6Q9UQ52 1028 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 FAM186AA6NE01 2351 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 HRO43593 1189 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 APBA1Q02410 837 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 C10orf76Q5T2E6 689 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 FMNL3Q8IVF7 1028 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 KIAA2013Q8IYS2 634 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 TSTD1Q8NFU3 115 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 PLD4Q96BZ4 506 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 TUBGCP2Q9BSJ2 902 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 MIS12Q9H081 205 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 MARK1Q9P0L2 795 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 MMP17Q9ULZ9 603 aa16.98■□□□□ 0.31
CPSF6-203ENST00000456847 KCNJ18B7U540 433 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 AXIN1O15169 862 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 KLF8O95600 359 aaPredicted RBP16.97■□□□□ 0.31
CPSF6-203ENST00000456847 PON1P27169 355 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 TNFRSF4P43489 277 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 KCNJ12Q14500 433 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 VWA3BQ502W6 1294 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 LAIR1Q6GTX8 287 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 DENND1CQ8IV53 801 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 SCML4Q8N228 414 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 ALLCQ8N6M5 410 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 TERB1Q8NA31 727 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 IRGQQ8WZA9 623 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 HSFY1Q96LI6 401 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 NDST4Q9H3R1 872 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 SFMBT1Q9UHJ3 866 aa16.97■□□□□ 0.31
CPSF6-203ENST00000456847 CCDC163A0A0D9SF12 145 aa16.96■□□□□ 0.31
CPSF6-203ENST00000456847 ANTXRLA6NF34 631 aa16.96■□□□□ 0.31
CPSF6-203ENST00000456847 CACNG3O60359 315 aa16.96■□□□□ 0.31
CPSF6-203ENST00000456847 RPP40O75818 363 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms