RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 KCNK16Q96T55 309 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 GTPBP2Q9BX10 602 aaKnown RBP8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 BBS2Q9BXC9 721 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 ZDHHC5Q9C0B5 715 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 CAPN10Q9HC96 672 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 KRT82Q9NSB4 513 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 TMEM74BQ9NUR3 256 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 DNAJC17Q9NVM6 304 aaKnown RBP8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 FAM13BQ9NYF5 915 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 MARK1Q9P0L2 795 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 GMIPQ9P107 970 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 CALCOCO1Q9P1Z2 691 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 CHORDC1Q9UHD1 332 aaPredicted RBP8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 MTMR6Q9Y217 621 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 ZNF510Q9Y2H8 683 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 IGF2RP11717 2491 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 ADAMTS9Q9P2N4 1935 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 NEDD8-MDP1E9PL57 170 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 SCAMP3O14828 347 aaKnown RBP8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 CLIC2O15247 247 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 CENPBP07199 599 aaPredicted RBP8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 FAM200BP0CF97 657 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 CLDN10P78369 228 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 EHHADHQ08426 723 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 STARD3Q14849 445 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 TMEM25Q86YD3 366 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 SLC9A9Q8IVB4 645 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 FUKQ8N0W3 1084 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 CRYBG2Q8N1P7 616 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 NAT16Q8N8M0 369 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 SCAMP5Q8TAC9 235 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 IPO4Q8TEX9 1081 aaKnown RBP8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 TMEM174Q8WUU8 243 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 UCMAQ8WVF2 138 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 ZNF516Q92618 1163 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 RNF166Q96A37 237 aaPredicted RBP8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 GABRG3Q99928 467 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 IMPG2Q9BZV3 1241 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 SMYD3Q9H7B4 428 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 CCSER2Q9H7U1 834 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 CSNK1G1Q9HCP0 422 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 PNPLA8Q9NP80 782 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 CYLDQ9NQC7 956 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 TMEM30AQ9NV96 361 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 DNAAF2Q9NVR5 837 aaKnown RBP8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 SCML2Q9UQR0 700 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 NFE2L3Q9Y4A8 694 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 NME7Q9Y5B8 376 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 PCDHB9Q9Y5E1 797 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 PCDHA5Q9Y5H7 936 aa8.47□□□□□ -1.05
NIF3L1-209ENST00000454952 PCDH15Q96QU1 1955 aa8.46□□□□□ -1.05
NIF3L1-209ENST00000454952 IGHV1OR15-9A0A0B4J2B8 117 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 SPAARA0A1B0GVQ0 90 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 A0A1W2PQF6 199 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 FAM221BA6H8Z2 402 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 SRRM3A6NNA2 597 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 PPP1R3GB7ZBB8 358 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 IKBKBO14920 756 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 POLR2DO15514 142 aaKnown RBP8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 HYAL3O43820 417 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 KIF20AO95235 890 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 IRF1P10914 325 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 RALAP11233 206 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 TYRP14679 529 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 SPINK2P20155 84 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 OXTRP30559 389 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 PLA2G4AP47712 749 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 DGKGP49619 791 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 CDH8P55286 799 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 MESP2Q0VG99 397 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 PLEKHG6Q3KR16 790 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 EGFLAMQ63HQ2 1017 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 ATL3Q6DD88 541 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 PAQR9Q6ZVX9 377 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 ACOT1Q86TX2 421 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 SFTPA1Q8IWL2 248 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 CEP57L1Q8IYX8 460 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 RGL4Q8IZJ4 473 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 ZNF276Q8N554 614 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 MINDY1Q8N5J2 469 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 FRMD1Q8N878 549 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 TRIML1Q8N9V2 468 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 CCDC150Q8NCX0 1101 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 SLC2A14Q8TDB8 520 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 PARD3BQ8TEW8 1205 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 ZNF419Q96HQ0 510 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 HSPA12BQ96MM6 686 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 KLF16Q9BXK1 252 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 DNMT3LQ9UJW3 386 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 FRMD4BQ9Y2L6 1034 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 ATRXP46100 2492 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 ATXN2Q99700 1313 aaKnown RBP8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 CFAP47Q6ZTR5 3102 aa8.46□□□□□ -1.06
NIF3L1-209ENST00000454952 LAMA1P25391 3075 aa8.45□□□□□ -1.06
NIF3L1-209ENST00000454952 LRRIQ3A6PVS8 624 aaPredicted RBP8.45□□□□□ -1.06
NIF3L1-209ENST00000454952 C4BPAP04003 597 aaKnown RBP8.45□□□□□ -1.06
NIF3L1-209ENST00000454952 MYL1P05976 194 aa8.45□□□□□ -1.06
NIF3L1-209ENST00000454952 NDUFV2P19404 249 aa8.45□□□□□ -1.06
NIF3L1-209ENST00000454952 CD6P30203 668 aa8.45□□□□□ -1.06
NIF3L1-209ENST00000454952 CHKAP35790 457 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms