RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 DOC2BQ14184 412 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 NAB2Q15742 525 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 KIF19Q2TAC6 998 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 GAB4Q2WGN9 574 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 SGO2Q562F6 1265 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 NKAPLQ5M9Q1 402 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 CAPRIN2Q6IMN6 1127 aaKnown RBP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 IQCEQ6IPM2 695 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 TTC30AQ86WT1 665 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 MCATQ8IVS2 390 aaKnown RBP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 MRPL41Q8IXM3 137 aaKnown RBP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 ALLCQ8N6M5 410 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 MFSD2AQ8NA29 543 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 TXNDC5Q8NBS9 432 aaKnown RBP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 CCDC26Q8TAB7 109 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 HASPINQ8TF76 798 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 FBLIM1Q8WUP2 373 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 ISL2Q96A47 359 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 SGF29Q96ES7 293 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 CCNL2Q96S94 520 aaPredicted RBP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 SEC62Q99442 399 aaKnown RBP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 SLC46A2Q9BY10 475 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 NACAP1Q9BZK3 213 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 NAPBQ9H115 298 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 SEMA6CQ9H3T2 930 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 ECT2Q9H8V3 914 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 CYP4F11Q9HBI6 524 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 TPSG1Q9NRR2 321 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 FTSJ1Q9UET6 329 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 ANAPC2Q9UJX6 822 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 CLCA2Q9UQC9 943 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 CCL26Q9Y258 94 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 EXOC6BQ9Y2D4 811 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 POLR3KQ9Y2Y1 108 aaPredicted RBP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 HES2Q9Y543 173 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 IPPQ9Y573 584 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 SLCO1B1Q9Y6L6 691 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 NUP210Q8TEM1 1887 aaPredicted RBP5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 ZFC3H1O60293 1989 aaKnown RBP5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 IGKV6-21A0A0C4DH24 114 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 KCNK3O14649 394 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 NOBOXO60393 691 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 VNN2O95498 520 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 DDAH2O95865 285 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 PRKCGP05129 697 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 GABRG2P18507 467 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 RAB6AP20340 208 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 NTF4P34130 210 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 OPRD1P41143 372 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 KIR2DL1P43626 348 aaPredicted RBP5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 CYP27A1Q02318 531 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 TWF1Q12792 350 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 ILKQ13418 452 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 TARBP2Q15633 366 aaKnown RBP5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 NFKBIBQ15653 356 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 KCNT1Q5JUK3 1230 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 SYCP2LQ5T4T6 812 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 EMC10Q5UCC4 262 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 FAM160B1Q5W0V3 765 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 RSRC2Q7L4I2 434 aaKnown RBP5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 SLC34A3Q8N130 599 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 RBBP8NLQ8NC74 664 aaPredicted RBP5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 CNNM3Q8NE01 707 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 OR6P1Q8NGX9 317 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 ARHGAP45Q92619 1136 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 PRR11Q96HE9 360 aaPredicted RBP5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 GPATCH3Q96I76 525 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 SLC46A1Q96NT5 459 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 FERD3LQ96RJ6 166 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 EIF2AQ9BY44 585 aaKnown RBP5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 PRKRIP1Q9H875 184 aaPredicted RBP5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 MINDY3Q9H8M7 445 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 AGO4Q9HCK5 861 aaKnown RBP5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 ZNF302Q9NR11 478 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 CALCOCO1Q9P1Z2 691 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 EFR3BQ9Y2G0 817 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 GIT1Q9Y2X7 761 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 PCDHB14Q9Y5E9 798 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 SNX11Q9Y5W9 270 aa5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 TDRD15B5MCY1 1934 aaKnown RBP5.79□□□□□ -1.48
SBDSP1-204ENST00000453858 A0A1B0GVT2 93 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 MEIS1O00470 390 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 N4BP3O15049 544 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 BCAT2O15382 392 aaPredicted RBP5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 MTSS1O43312 755 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 CYTH3O43739 400 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 CST3P01034 146 aaPredicted RBP5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 IFIT2P09913 472 aaKnown RBP5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 TKTP29401 623 aaKnown RBP5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 ELF1P32519 619 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 GABREP78334 506 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 ELAVL2Q12926 359 aaKnown RBP5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 MORC3Q14149 939 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 CPSF6Q16630 551 aaKnown RBP eCLIP5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 WDR45BQ5MNZ6 344 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 CDCP2Q5VXM1 449 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 TPGS2Q68CL5 300 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 SEZ6L2Q6UXD5 910 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 GK5Q6ZS86 529 aa5.78□□□□□ -1.48
SBDSP1-204ENST00000453858 CATSPER4Q7RTX7 472 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms