RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.44■□□□□ 0.86
HIGD1A-204ENST00000452906 COMMD8Q9NX08 183 aa20.44■□□□□ 0.86
HIGD1A-204ENST00000452906 ABI2Q9NYB9 513 aaPredicted RBP20.44■□□□□ 0.86
HIGD1A-204ENST00000452906 RAPGEFL1Q9UHV5 662 aa20.44■□□□□ 0.86
HIGD1A-204ENST00000452906 USP18Q9UMW8 372 aa20.44■□□□□ 0.86
HIGD1A-204ENST00000452906 SSX2IPQ9Y2D8 614 aa20.44■□□□□ 0.86
HIGD1A-204ENST00000452906 EFR3BQ9Y2G0 817 aa20.44■□□□□ 0.86
HIGD1A-204ENST00000452906 NT5C1B-RDH14C9J2C7 533 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 HHLA1C9JL84 531 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 CAPN9O14815 690 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 PER2O15055 1255 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 TBC1D4O60343 1298 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 GRAP2O75791 330 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 GJC1P36383 396 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 GLUD2P49448 558 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 RPL10AP62906 217 aaKnown RBP20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 SLC25A11Q02978 314 aaKnown RBP20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 PSMD5Q16401 504 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 SLC25A52Q3SY17 297 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 CCDC14Q49A88 953 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 PLPP4Q5VZY2 271 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 PM20D1Q6GTS8 502 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 MAP7D3Q8IWC1 876 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 ARHGAP18Q8N392 663 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 FAM172AQ8WUF8 416 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 SLC2A13Q96QE2 648 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 KCNK16Q96T55 309 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 EHD2Q9NZN4 543 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 HSFX1Q9UBD0 423 aa20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 V9GYY5 206 aaPredicted RBP20.43■□□□□ 0.86
HIGD1A-204ENST00000452906 PLXNA3P51805 1871 aa20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 FAM86C2PA6NEL3 165 aa20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 LTFP02788 710 aa20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 MIPP30301 263 aa20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 KCNC3Q14003 757 aa20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 RTP2Q5QGT7 225 aa20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 SLC8B1Q6J4K2 584 aa20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 MAATS1Q7Z4T9 603 aa20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 DDX53Q86TM3 631 aaKnown RBP20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 CPNE8Q86YQ8 564 aa20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 NOA1Q8NC60 698 aaKnown RBP20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 CLEC4CQ8WTT0 213 aa20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 RIN2Q8WYP3 895 aaPredicted RBP20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 CENPIQ92674 756 aaPredicted RBP20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 PIWIL1Q96J94 861 aaKnown RBP20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 CFAP57Q96MR6 1250 aa20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 CHST7Q9NS84 486 aa20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 USP15Q9Y4E8 981 aaPredicted RBP20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 USP3Q9Y6I4 520 aa20.42■□□□□ 0.86
HIGD1A-204ENST00000452906 TJP3O95049 919 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 RTN3O95197 1032 aaPredicted RBP20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 TRUB2O95900 331 aaKnown RBP20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 URODP06132 367 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 OR4Q2P0C623 313 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 CYP2F1P24903 491 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 CHRNA3P32297 505 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 CA8P35219 290 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 AIF1P55008 147 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 DSG1Q02413 1049 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 PDK2Q15119 407 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 TFDP3Q5H9I0 405 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 TMEM173Q86WV6 379 aaPredicted RBP20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 PSTKQ8IV42 348 aaKnown RBP20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 SCN4BQ8IWT1 228 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 DEFB106AQ8N104 65 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 VN1R2Q8NFZ6 395 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 BCL7CQ8WUZ0 217 aaPredicted RBP20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 SLITRK1Q96PX8 696 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 OSBPL8Q9BZF1 889 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 SMARCAL1Q9NZC9 954 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 MAFFQ9ULX9 164 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 MUC6Q6W4X9 2439 aa20.41■□□□□ 0.86
HIGD1A-204ENST00000452906 LRRD1A4D1F6 860 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 MTMR11A4FU01 709 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 ZNF487B1APH4 448 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 MDM4O15151 490 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 PHF2O75151 1096 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 ERLIN1O75477 346 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 F9P00740 461 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 PLA2G5P39877 138 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 SULT1E1P49888 294 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 CACNA2D1P54289 1103 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 ATP11AP98196 1134 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 DHX34Q14147 1143 aaKnown RBP20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 TAF5Q15542 800 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 CDO1Q16878 200 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 DCAF6Q58WW2 860 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 TPGS2Q68CL5 300 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 VPS52Q8N1B4 723 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 NUP93Q8N1F7 819 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 MRPL43Q8N983 215 aaKnown RBP20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 C12orf50Q8NA57 414 aaPredicted RBP20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 CMASQ8NFW8 434 aaPredicted RBP20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 SUSD6Q92537 303 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 SPATA17Q96L03 361 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 FRMD8P1Q9BZ68 369 aaPredicted RBP20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 ZWILCHQ9H900 591 aa20.4■□□□□ 0.86
HIGD1A-204ENST00000452906 FEZ2Q9UHY8 353 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms