RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ZBTB24O43167 697 aaPredicted RBP11.49□□□□□ -0.57
USP1-204ENST00000452143 ACTN4O43707 911 aaKnown RBP11.49□□□□□ -0.57
USP1-204ENST00000452143 BEST1O76090 585 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 IRF1P10914 325 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 ITPKAP23677 461 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 PIK3CAP42336 1068 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 MAPK8P45983 427 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 PSEN1P49768 467 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 MAP3K7CLP57077 242 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 DLG4P78352 724 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 RPL6Q02878 288 aaKnown RBP11.49□□□□□ -0.57
USP1-204ENST00000452143 ENPEPQ07075 957 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 STK4Q13043 487 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 UAP1L1Q3KQV9 507 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 SDE2Q6IQ49 451 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 CLEC20AQ6ZU45 233 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 SV2AQ7L0J3 742 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 TADA2BQ86TJ2 420 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 CHPFQ8IZ52 775 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 FRMD1Q8N878 549 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 HNRNPABQ99729 332 aaKnown RBP11.49□□□□□ -0.57
USP1-204ENST00000452143 BBS2Q9BXC9 721 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 KLF16Q9BXK1 252 aaPredicted RBP11.49□□□□□ -0.57
USP1-204ENST00000452143 KRTAP3-3Q9BYR6 98 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 KRTAP3-2Q9BYR7 98 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 DNAI2Q9GZS0 605 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 CD248Q9HCU0 757 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 FAM49BQ9NUQ9 324 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 USP25Q9UHP3 1055 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 FRMD4BQ9Y2L6 1034 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 ATXN2Q99700 1313 aaKnown RBP11.49□□□□□ -0.57
USP1-204ENST00000452143 DMXL2Q8TDJ6 3036 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
USP1-204ENST00000452143 IGHV1OR15-9A0A0B4J2B8 117 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 A0A1W2PQF6 199 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 C1QTNF9BB2RNN3 333 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 GFRA2O00451 464 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 CYP26A1O43174 497 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 CALUO43852 315 aaPredicted RBP11.48□□□□□ -0.57
USP1-204ENST00000452143 KIF20AO95235 890 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 CFIP05156 583 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 HSP90AA1P07900 732 aaKnown RBP11.48□□□□□ -0.57
USP1-204ENST00000452143 SERPINF2P08697 491 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 C1QTNF9P0C862 333 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 TYRP14679 529 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 ATXN3P54252 364 aaPredicted RBP11.48□□□□□ -0.57
USP1-204ENST00000452143 GFPT1Q06210 699 aaPredicted RBP11.48□□□□□ -0.57
USP1-204ENST00000452143 DUOXA1Q1HG43 343 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 KMT5BQ4FZB7 885 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 EGFLAMQ63HQ2 1017 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 INTS8Q75QN2 995 aaKnown RBP11.48□□□□□ -0.57
USP1-204ENST00000452143 MIB1Q86YT6 1006 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 GRAMD1CQ8IYS0 662 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 ZNF276Q8N554 614 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 C12orf29Q8N999 325 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 KDF1Q8NAX2 398 aaPredicted RBP11.48□□□□□ -0.57
USP1-204ENST00000452143 DEFB124Q8NES8 71 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 WBP2Q969T9 261 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 PAGE5Q96GU1 130 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 CDK5RAP1Q96SZ6 601 aaKnown RBP11.48□□□□□ -0.57
USP1-204ENST00000452143 NT5C1AQ9BXI3 368 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 CYP3A43Q9HB55 503 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 CAPN10Q9HC96 672 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 SERTAD1Q9UHV2 236 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 HCN2Q9UL51 889 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 SLC6A14Q9UN76 642 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 TRAF3IP3Q9Y228 551 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 CKAP5Q14008 2032 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 CACNA1GO43497 2377 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 FREM2Q5SZK8 3169 aa11.48□□□□□ -0.57
USP1-204ENST00000452143 A0A1W2PQD8 194 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 HHLA1C9JL84 531 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 NPC1O15118 1278 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 TBX18O95935 607 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 HLA-DRAP01903 254 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 NDUFV2P19404 249 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 ACO1P21399 889 aaKnown RBP11.47□□□□□ -0.57
USP1-204ENST00000452143 ADORA2BP29275 332 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 DGKGP49619 791 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 PGFP49763 221 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 VAMP7P51809 220 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 ZNF33AQ06730 810 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 SEMA3BQ13214 749 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 ORC1Q13415 861 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 NFIL3Q16649 462 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 FOXD4L6Q3SYB3 417 aaPredicted RBP11.47□□□□□ -0.57
USP1-204ENST00000452143 FOXD4L5Q5VV16 416 aaPredicted RBP11.47□□□□□ -0.57
USP1-204ENST00000452143 CEP135Q66GS9 1140 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 FOXD4L3Q6VB84 417 aaPredicted RBP11.47□□□□□ -0.57
USP1-204ENST00000452143 Q6ZNB5 142 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 GPRIN1Q7Z2K8 1008 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 CCDC186Q7Z3E2 898 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 PIP4P1Q86T03 277 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 HSCBQ8IWL3 235 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 HDDC3Q8N4P3 179 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 IPO4Q8TEX9 1081 aaKnown RBP11.47□□□□□ -0.57
USP1-204ENST00000452143 FOXD4L4Q8WXT5 416 aaPredicted RBP11.47□□□□□ -0.57
USP1-204ENST00000452143 ELMO3Q96BJ8 720 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 HS3ST6Q96QI5 342 aa11.47□□□□□ -0.57
USP1-204ENST00000452143 SCNM1Q9BWG6 230 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms