RNA–Protein interactions for RNA: ENST00000452029.1

TMEM87B-202, Transcript of transmembrane protein 87B, humanhuman

TSL 1 (best)

Gene TMEM87B, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87B-202ENST00000452029 VSX1Q9NZR4 365 aaPredicted RBP5.39□□□□□ -1.55
TMEM87B-202ENST00000452029 GDAQ9Y2T3 454 aa5.39□□□□□ -1.55
TMEM87B-202ENST00000452029 PCDHGB5Q9Y5G0 923 aa5.39□□□□□ -1.55
TMEM87B-202ENST00000452029 LOC105369274A0A096LPK9 316 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 LOC102723532A0A0G2JNH3 316 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 FAM90A7PA6NKC0 464 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 TBKBP1A7MCY6 615 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 SMTNL1A8MU46 457 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 FAM90A22PA8MWA6 464 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 FAM90A12PA8MX19 464 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 FAM90A23PA8MXZ1 464 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 B5MCH6 92 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 TSPAN4O14817 238 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 SEPT4O43236 478 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 DHX16O60231 1041 aaKnown RBP5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 PRSS23O95084 383 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 RNASE1P07998 156 aaKnown RBP5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 ICAM3P32942 547 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 IL13P35225 146 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 FAM3BP58499 235 aaPredicted RBP5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 TBL3Q12788 808 aaKnown RBP5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 LRMPQ12912 555 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 CSRP2Q16527 193 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 TBR1Q16650 682 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 TBRG1Q3YBR2 411 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 GPR139Q6DWJ6 353 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 DENND1BQ6P3S1 775 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 SYNE3Q6ZMZ3 975 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 MFSD6Q6ZSS7 791 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 PIK3AP1Q6ZUJ8 805 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 ADGRE4PQ86SQ3 457 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 VSIG10LQ86VR7 867 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 TMEFF1Q8IYR6 380 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 OR4N4Q8N0Y3 316 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 NDUFAF2Q8N183 169 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 WDTC1Q8N5D0 677 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 ANKRD44Q8N8A2 993 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 FSIP1Q8NA03 581 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 SH3KBP1Q96B97 665 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 AJUBAQ96IF1 538 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 LRIG1Q96JA1 1093 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 PPP1R10Q96QC0 940 aaKnown RBP5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 KRTAP17-1Q9BYP8 105 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 EDEM3Q9BZQ6 932 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 INTS2Q9H0H0 1204 aaKnown RBP5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 SLC6A17Q9H1V8 727 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 CXorf36Q9H7Y0 433 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 CD248Q9HCU0 757 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 USP22Q9UPT9 525 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 MRPS17Q9Y2R5 130 aaKnown RBP5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 NEU2Q9Y3R4 380 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 COL15A1P39059 1388 aa5.38□□□□□ -1.55
TMEM87B-202ENST00000452029 C17orf113A0A1B0GUU1 675 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 PI4K2BG5E9Z4 385 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 POLRMTO00411 1230 aaKnown RBP5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 HNRNPCP07910 306 aaKnown RBP eCLIP5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 ZNF28P17035 718 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 CHRM3P20309 590 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 IGFBP6P24592 240 aaPredicted RBP5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 BSGP35613 385 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 GARSP41250 739 aaKnown RBP5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 PPP5CP53041 499 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 NCKAP1LP55160 1127 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 LOXL3P58215 753 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 PSMC6P62333 389 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 PPP2R5CQ13362 524 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 NOMO2Q5JPE7 1267 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 C1orf141Q5JVX7 400 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 TAF2Q6P1X5 1199 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 IL27RAQ6UWB1 636 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 Q6ZUG5 572 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 DENND5BQ6ZUT9 1274 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 LDHDQ86WU2 507 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 REXO1L1PQ8IX06 675 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 ULK2Q8IYT8 1036 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 ABI1Q8IZP0 508 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 TAGAPQ8N103 731 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 SCML4Q8N228 414 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 PTGR2Q8N8N7 351 aaPredicted RBP5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 PSD4Q8NDX1 1056 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 TOR1AIP2Q8NFQ8 470 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 FNIP1Q8TF40 1166 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 ATRIPQ8WXE1 791 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 SPATA17Q96L03 361 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 JAKMIP1Q96N16 626 aaKnown RBP5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 HIST1H2AAQ96QV6 131 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 CARD11Q9BXL7 1154 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 TTYH1Q9H313 450 aaPredicted RBP5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 CCDC134Q9H6E4 229 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 VEZTQ9HBM0 779 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 GBA2Q9HCG7 927 aaPredicted RBP5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 PDE7BQ9NP56 450 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 PCDHB16Q9NRJ7 776 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 BEX4Q9NWD9 120 aaPredicted RBP5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 NCDNQ9UBB6 729 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 MORF4L1Q9UBU8 362 aa5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 CHORDC1Q9UHD1 332 aaPredicted RBP5.37□□□□□ -1.55
TMEM87B-202ENST00000452029 SARDHQ9UL12 918 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms