RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 FKBP3Q00688 224 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 KLHL30Q0D2K2 578 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 CLUL1Q15846 466 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 ASIC2Q16515 512 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 HLFQ16534 295 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 PABPC1LQ4VXU2 614 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 TDRD12Q587J7 1177 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 CCDC178Q5BJE1 867 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 ODF2Q5BJF6 829 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 FAM133BQ5BKY9 247 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 KIAA1755Q5JYT7 1200 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 UBAP2Q5T6F2 1119 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 DCAF12L1Q5VU92 463 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 MRM1Q6IN84 353 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 IRGCQ6NXR0 463 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 ALKBH5Q6P6C2 394 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 RHBDF2Q6PJF5 856 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 RGS9BPQ6ZS82 235 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 KRT28Q7Z3Y7 464 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 EXOC3L1Q86VI1 746 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 NBPF5PQ86XG9 351 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 DGKHQ86XP1 1220 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 ECHDC2Q86YB7 292 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZNF34Q8IZ26 560 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 SYCE1Q8N0S2 351 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 CNBD1Q8NA66 436 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 PHOSPHO1Q8TCT1 267 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 TEKT4Q8WW24 435 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 RAD54LQ92698 747 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 ART4Q93070 314 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 HPS3Q969F9 1004 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 KLHL29Q96CT2 875 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC7A6OSQ96CW6 309 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 EEF2KMTQ96G04 330 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 C1orf159Q96HA4 380 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZNF333Q96JL9 665 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 TRAPPC9Q96Q05 1148 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 CRAMP1Q96RY5 1269 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 ORAI2Q96SN7 254 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 PRMT1Q99873 361 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 TINF2Q9BSI4 451 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 TRIM51Q9BSJ1 452 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 AP1M1Q9BXS5 423 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 CELF4Q9BZC1 486 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 STMN4Q9H169 189 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 DPH5Q9H2P9 285 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 KCTD10Q9H3F6 313 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 AZI2Q9H6S1 392 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 PAPOLBQ9NRJ5 636 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 CNNM1Q9NRU3 951 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 TCP11L1Q9NUJ3 509 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 BARHL2Q9NY43 387 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 EURLQ9NYK6 297 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 HSPBP1Q9NZL4 362 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 RGL1Q9NZL6 768 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 CPSF2Q9P2I0 782 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 PPARGC1AQ9UBK2 798 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 PCYOX1Q9UHG3 505 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 LGALS13Q9UHV8 139 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 UTP11Q9Y3A2 253 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 SH3BP1Q9Y3L3 701 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 TNRC6CQ9HCJ0 1690 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 COL4A1P02462 1669 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 CYP2D7A0A087X1C5 515 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 CCDC194A0A1B0GVG4 234 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 GTPBP10A4D1E9 387 aaKnown RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 LRRD1A4D1F6 860 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 ERVV-1B6SEH8 477 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 MUSKO15146 869 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 RGS16O15492 202 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 COQ9O75208 318 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 KLHL18O94889 574 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 FBXO21O94952 628 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 PENKP01210 267 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 AFPP02771 609 aaKnown RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 LTFP02788 710 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 H2AFZP0C0S5 128 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 T-ENOLP0DO92 83 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 PIM1P11309 404 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 VCAM1P19320 739 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 CDC25CP30307 473 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 KIF5BP33176 963 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 PEX19P40855 299 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 PSMC4P43686 418 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 NOVP48745 357 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC18A1P54219 525 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 LACTBP83111 547 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 PFKPQ01813 784 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 OCRLQ01968 901 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 ARID5AQ03989 594 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 MAPK7Q13164 816 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 SNX1Q13596 522 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 MOGSQ13724 837 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC29A2Q14542 456 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 EPHA7Q15375 998 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 SIX1Q15475 284 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 TAF11Q15544 211 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 EDRF1Q3B7T1 1238 aa4.39□□□□□ -1.71
HMGB3P22-202ENST00000451823 CCDC152Q4G0S7 254 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms