RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TBC1D7Q9P0N9 293 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PCYOX1Q9UHG3 505 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ZNHIT2Q9UHR6 403 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DENND2AQ9ULE3 1009 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ZBTB21Q9ULJ3 1066 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ABCG2Q9UNQ0 655 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 SHOC2Q9UQ13 582 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PRG3Q9Y2Y8 225 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 PCDHGA11Q9Y5H2 935 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 N6AMT1Q9Y5N5 214 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DLC1Q96QB1 1528 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 IRGMA1A4Y4 181 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 FUOMA2VDF0 154 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ARHGEF35A5YM69 484 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 BBIP1A8MTZ0 92 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 MINDY4BA8MYZ0 360 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PSMD11O00231 422 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 EEF2KO00418 725 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 PLK4O00444 970 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 GSC2O15499 205 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CLOCKO15516 846 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DENRO43583 198 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 DYRK3O43781 588 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 EDF1O60869 148 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 PEX14O75381 377 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 SOX30O94993 753 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 H6PDO95479 791 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 WDPCPO95876 746 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ALOX12P18054 663 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 RAB4AP20338 218 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 RBL1P28749 1068 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TIE1P35590 1138 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ADD2P35612 726 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 NUDT2P50583 147 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ATXN3P54252 364 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 ATP2C1P98194 919 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 GRSF1Q12849 480 aaKnown RBP eCLIP2.27□□□□□ -2.05
USP53-202ENST00000450251 KIF19Q2TAC6 998 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 VWA5B1Q5TIE3 1220 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 FAM91A1Q658Y4 838 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TTI2Q6NXR4 508 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CASC4Q6P4E1 433 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ATG14Q6ZNE5 492 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PGAP1Q75T13 922 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DGLUCYQ7Z3D6 616 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ZNF677Q86XU0 584 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TDRPQ86YL5 185 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CCDC60Q8IWA6 550 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 FAM9CQ8IZT9 166 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ARL6IP6Q8N6S5 226 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ZNF564Q8TBZ8 553 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 SNX19Q92543 992 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PHF21AQ96BD5 680 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 HDAC11Q96DB2 347 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 NT5C1BQ96P26 610 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ERMAPQ96PL5 475 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 PSKH2Q96QS6 385 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 RBM15Q96T37 977 aaKnown RBP eCLIP2.27□□□□□ -2.05
USP53-202ENST00000450251 DNAJC11Q9NVH1 559 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ZDHHC7Q9NXF8 308 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PTTG3PQ9NZH4 202 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 VPS54Q9P1Q0 977 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DBR1Q9UK59 544 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 ANKRD6Q9Y2G4 727 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 SNX9Q9Y5X1 595 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 NHSL1Q5SYE7 1610 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PI4KAP2A4QPH2 592 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 EFCAB10A6NFE3 127 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CCDC154A6NI56 674 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 AGPSO00116 658 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TK2O00142 265 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 RNF103O00237 685 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CCRL2O00421 344 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TOM1O60784 492 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DNAJA2O60884 412 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CLPXO76031 633 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 MYO1DO94832 1006 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 GLI1P08151 1106 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DLATP10515 647 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 HSPD1P10809 573 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 CYP19A1P11511 503 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 MYCLP1P12525 358 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 HOXB3P14651 431 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 TALDO1P37837 337 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CD79BP40259 229 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PHKA2P46019 1235 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CCR3P51677 355 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 AKR1D1P51857 326 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CABP4P57796 275 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 MVKQ03426 396 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TNK2Q07912 1038 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PTGDRQ13258 359 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PLS1Q14651 629 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DDB1Q16531 1140 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CCDC142Q17RM4 750 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 NAALADL2Q58DX5 795 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CCNYL2Q5T2Q4 361 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 C6orf183Q5T699 404 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 SLC9A4Q6AI14 798 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 IYDQ6PHW0 289 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms