RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 OLFM2O95897 454 aa18.48■□□□□ 0.55
FAM3A-216ENST00000449971 ACO1P21399 889 aaKnown RBP18.48■□□□□ 0.55
FAM3A-216ENST00000449971 YWHAEP62258 255 aaKnown RBP18.48■□□□□ 0.55
FAM3A-216ENST00000449971 CETN1Q12798 172 aa18.48■□□□□ 0.55
FAM3A-216ENST00000449971 NR1H3Q13133 447 aa18.48■□□□□ 0.55
FAM3A-216ENST00000449971 EML3Q32P44 896 aa18.48■□□□□ 0.55
FAM3A-216ENST00000449971 GPRIN1Q7Z2K8 1008 aa18.48■□□□□ 0.55
FAM3A-216ENST00000449971 GATA6Q92908 595 aa18.48■□□□□ 0.55
FAM3A-216ENST00000449971 DUSP16Q9BY84 665 aa18.48■□□□□ 0.55
FAM3A-216ENST00000449971 NACA2Q9H009 215 aa18.48■□□□□ 0.55
FAM3A-216ENST00000449971 CCSER2Q9H7U1 834 aa18.48■□□□□ 0.55
FAM3A-216ENST00000449971 CFAP97Q9P2B7 532 aa18.48■□□□□ 0.55
FAM3A-216ENST00000449971 LHX6Q9UPM6 363 aa18.48■□□□□ 0.55
FAM3A-216ENST00000449971 DMXL2Q8TDJ6 3036 aa18.48■□□□□ 0.55
FAM3A-216ENST00000449971 PTPRDP23468 1912 aa18.47■□□□□ 0.55
FAM3A-216ENST00000449971 FAM92AA1XBS5 289 aa18.47■□□□□ 0.55
FAM3A-216ENST00000449971 HHLA1C9JL84 531 aa18.47■□□□□ 0.55
FAM3A-216ENST00000449971 ZDHHC11BP0C7U3 371 aa18.47■□□□□ 0.55
FAM3A-216ENST00000449971 RING1Q06587 406 aa18.47■□□□□ 0.55
FAM3A-216ENST00000449971 SNX30Q5VWJ9 437 aa18.47■□□□□ 0.55
FAM3A-216ENST00000449971 CREBRFQ8IUR6 639 aa18.47■□□□□ 0.55
FAM3A-216ENST00000449971 RLN3Q8WXF3 142 aa18.47■□□□□ 0.55
FAM3A-216ENST00000449971 CLSTN2Q9H4D0 955 aa18.47■□□□□ 0.55
FAM3A-216ENST00000449971 FAM124BQ9H5Z6 455 aaPredicted RBP18.47■□□□□ 0.55
FAM3A-216ENST00000449971 TLR8Q9NR97 1041 aaKnown RBP18.47■□□□□ 0.55
FAM3A-216ENST00000449971 CACNA1EQ15878 2313 aa18.47■□□□□ 0.55
FAM3A-216ENST00000449971 SPAARA0A1B0GVQ0 90 aa18.46■□□□□ 0.55
FAM3A-216ENST00000449971 TMEM8BA6NDV4 472 aa18.46■□□□□ 0.55
FAM3A-216ENST00000449971 SCAMP3O14828 347 aaKnown RBP18.46■□□□□ 0.55
FAM3A-216ENST00000449971 PMM2O15305 246 aa18.46■□□□□ 0.55
FAM3A-216ENST00000449971 NFATC1O95644 943 aa18.46■□□□□ 0.55
FAM3A-216ENST00000449971 CSRP1P21291 193 aaKnown RBP18.46■□□□□ 0.55
FAM3A-216ENST00000449971 TBXAS1P24557 533 aaPredicted RBP18.46■□□□□ 0.55
FAM3A-216ENST00000449971 PGFP49763 221 aa18.46■□□□□ 0.55
FAM3A-216ENST00000449971 KCNH2Q12809 1159 aa18.46■□□□□ 0.55
FAM3A-216ENST00000449971 TRIM61Q5EBN2 209 aa18.46■□□□□ 0.55
FAM3A-216ENST00000449971 DDX42Q86XP3 938 aaKnown RBP eCLIP18.46■□□□□ 0.55
FAM3A-216ENST00000449971 TRIM59Q8IWR1 403 aa18.46■□□□□ 0.55
FAM3A-216ENST00000449971 MDGA1Q8NFP4 955 aa18.46■□□□□ 0.55
FAM3A-216ENST00000449971 NT5C1BQ96P26 610 aa18.46■□□□□ 0.55
FAM3A-216ENST00000449971 PNPLA8Q9NP80 782 aa18.46■□□□□ 0.55
FAM3A-216ENST00000449971 RWDD2AQ9UIY3 292 aa18.46■□□□□ 0.55
FAM3A-216ENST00000449971 SCML2Q9UQR0 700 aa18.46■□□□□ 0.55
FAM3A-216ENST00000449971 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.46■□□□□ 0.55
FAM3A-216ENST00000449971 ATXN2Q99700 1313 aaKnown RBP18.46■□□□□ 0.55
FAM3A-216ENST00000449971 DENND4CQ5VZ89 1909 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 SLC9A3R1O14745 358 aaPredicted RBP18.45■□□□□ 0.54
FAM3A-216ENST00000449971 P4HA2O15460 535 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 CYP26A1O43174 497 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 MAP3K13O43283 966 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 CD19P15391 556 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 TUBP50607 506 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 ARHGAP17Q68EM7 881 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 C11orf74Q86VG3 221 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 TMEFF1Q8IYR6 380 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 EHBP1Q8NDI1 1231 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 USP33Q8TEY7 942 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 FSCN3Q9NQT6 498 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 KLK13Q9UKR3 277 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 OBSL1O75147 1896 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 PKD1L2Q7Z442 2459 aa18.45■□□□□ 0.54
FAM3A-216ENST00000449971 DSPP15924 2871 aaKnown RBP18.44■□□□□ 0.54
FAM3A-216ENST00000449971 TLR5O60602 858 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 AFPP02771 609 aaKnown RBP18.44■□□□□ 0.54
FAM3A-216ENST00000449971 KIF11P52732 1056 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 MARSP56192 900 aaKnown RBP18.44■□□□□ 0.54
FAM3A-216ENST00000449971 SLC8A3P57103 927 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 GOLGA7BQ2TAP0 167 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 SGO2Q562F6 1265 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 LRSAM1Q6UWE0 723 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 ADGRG2Q8IZP9 1017 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 PPM1KQ8N3J5 372 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 FRMD1Q8N878 549 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 MLKLQ8NB16 471 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 ANKRD52Q8NB46 1076 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 NUSAP1Q9BXS6 441 aaKnown RBP18.44■□□□□ 0.54
FAM3A-216ENST00000449971 SLC32A1Q9H598 525 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 BCCIPQ9P287 314 aaKnown RBP eCLIP18.44■□□□□ 0.54
FAM3A-216ENST00000449971 SH3BP1Q9Y3L3 701 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 PCDHB4Q9Y5E5 795 aa18.44■□□□□ 0.54
FAM3A-216ENST00000449971 ANKRD11Q6UB99 2663 aaPredicted RBP18.43■□□□□ 0.54
FAM3A-216ENST00000449971 A0A1W2PQH9 124 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 E2F8A0AVK6 867 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 K7EQS6 105 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 TBX18O95935 607 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 CFIP05156 583 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 IRF1P10914 325 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 ATP5C1P36542 298 aaKnown RBP18.43■□□□□ 0.54
FAM3A-216ENST00000449971 SIM1P81133 766 aaPredicted RBP18.43■□□□□ 0.54
FAM3A-216ENST00000449971 TMEM270Q6UE05 265 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 CLEC17AQ6ZS10 378 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 RRAGAQ7L523 313 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 LPCAT2Q7L5N7 544 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 SFTPA1Q8IWL2 248 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 KIAA1958Q8N8K9 716 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 LMO3Q8TAP4 145 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 KAT5Q92993 513 aa18.43■□□□□ 0.54
FAM3A-216ENST00000449971 ZFRQ96KR1 1074 aaKnown RBP18.43■□□□□ 0.54
FAM3A-216ENST00000449971 CNOT6LQ96LI5 555 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms