RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 C2CD4DB7Z1M9 353 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 SYF2O95926 243 aaKnown RBP10.32□□□□□ -0.76
CCDC171-203ENST00000449575 ERBB2P04626 1255 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 RHOXF2BP0C7M4 288 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 KLHL30Q0D2K2 578 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 TAF5Q15542 800 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 MAB21L3Q8N8X9 362 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 DNAJC7Q99615 494 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 NAPGQ99747 312 aaPredicted RBP10.32□□□□□ -0.76
CCDC171-203ENST00000449575 RHOXF2Q9BQY4 288 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 SLC4A5Q9BY07 1137 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 SLC46A2Q9BY10 475 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 RNF38Q9H0F5 515 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 LHX5Q9H2C1 402 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 PNPLA8Q9NP80 782 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 ABHD10Q9NUJ1 306 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 SEPT11Q9NVA2 429 aaKnown RBP10.32□□□□□ -0.76
CCDC171-203ENST00000449575 A0A1W2PQH9 124 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 ZNF840PA6NDX5 716 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 YJEFN3A6XGL0 299 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 AKR1B15C9JRZ8 316 aaPredicted RBP10.32□□□□□ -0.76
CCDC171-203ENST00000449575 E7ENQ6 273 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 DDX3XO00571 662 aaKnown RBP eCLIP10.32□□□□□ -0.76
CCDC171-203ENST00000449575 PAPSS1O43252 624 aaPredicted RBP10.32□□□□□ -0.76
CCDC171-203ENST00000449575 KIAA0754O94854 1291 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 TBX18O95935 607 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 CYP1A1P04798 512 aaPredicted RBP10.32□□□□□ -0.76
CCDC171-203ENST00000449575 UNGP13051 313 aaPredicted RBP10.32□□□□□ -0.76
CCDC171-203ENST00000449575 CDH5P33151 784 aaPredicted RBP10.32□□□□□ -0.76
CCDC171-203ENST00000449575 PRKCIP41743 596 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 CCT5P48643 541 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 ZXDBP98169 803 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 ZNF569Q5MCW4 686 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 KCTD13Q8WZ19 329 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 ASB2Q96Q27 587 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 CCSER2Q9H7U1 834 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 LRRC4Q9HBW1 653 aa10.32□□□□□ -0.76
CCDC171-203ENST00000449575 CHUKO15111 745 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 GBP2P32456 591 aaPredicted RBP10.31□□□□□ -0.76
CCDC171-203ENST00000449575 RPL34P49207 117 aaKnown RBP10.31□□□□□ -0.76
CCDC171-203ENST00000449575 SLC8A3P57103 927 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 MRPS5P82675 430 aaKnown RBP10.31□□□□□ -0.76
CCDC171-203ENST00000449575 TDRD12Q587J7 1177 aaKnown RBP10.31□□□□□ -0.76
CCDC171-203ENST00000449575 GPR158Q5T848 1215 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 OR8K1Q8NGG5 319 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 RIN3Q8TB24 985 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 RPP25Q9BUL9 199 aaKnown RBP10.31□□□□□ -0.76
CCDC171-203ENST00000449575 TRPC7Q9HCX4 862 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 CD320Q9NPF0 282 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 SCML2Q9UQR0 700 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 ADGRG1Q9Y653 693 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 H0YHG0 523 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 MDM4O15151 490 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 RTN3O95197 1032 aaPredicted RBP10.31□□□□□ -0.76
CCDC171-203ENST00000449575 GJB6O95452 261 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 ZBED1O96006 694 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 ZDHHC11BP0C7U3 371 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 ARHGAP25P42331 645 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 DAOAP59103 153 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 PM20D1Q6GTS8 502 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 CYP26C1Q6V0L0 522 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 MICALCLQ6ZW33 695 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 TMEM110Q86TL2 294 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.31□□□□□ -0.76
CCDC171-203ENST00000449575 ARL14EPQ8N8R7 260 aaPredicted RBP10.31□□□□□ -0.76
CCDC171-203ENST00000449575 RSAD2Q8WXG1 361 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 RSPRY1Q96DX4 576 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 NECTIN4Q96NY8 510 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 SLITRK1Q96PX8 696 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 PHF7Q9BWX1 381 aaPredicted RBP10.31□□□□□ -0.76
CCDC171-203ENST00000449575 SLITRK6Q9H5Y7 841 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 LZTFL1Q9NQ48 299 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 AVENQ9NQS1 362 aaPredicted RBP10.31□□□□□ -0.76
CCDC171-203ENST00000449575 ADAMTS1Q9UHI8 967 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 HPCAL4Q9UM19 191 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 CCL26Q9Y258 94 aa10.31□□□□□ -0.76
CCDC171-203ENST00000449575 A0A087X0T9 212 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 TARSL2A2RTX5 802 aaKnown RBP10.3□□□□□ -0.76
CCDC171-203ENST00000449575 GRAP2O75791 330 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 PRAMEF12O95522 483 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 FAM228BP0C875 321 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 HNRNPH3P31942 346 aaKnown RBP10.3□□□□□ -0.76
CCDC171-203ENST00000449575 IRAK1P51617 712 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 TRIM14Q14142 442 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 MEA1Q16626 185 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 CLEC16AQ2KHT3 1053 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 FAM183BPQ6ZVS7 135 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 ZNF677Q86XU0 584 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 SIX6OS1Q8N1H7 587 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 TMEM35BQ8NCS4 154 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 ATXN2LQ8WWM7 1075 aaKnown RBP10.3□□□□□ -0.76
CCDC171-203ENST00000449575 EDEM1Q92611 657 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 SYN2Q92777 582 aaPredicted RBP10.3□□□□□ -0.76
CCDC171-203ENST00000449575 FGF14Q92915 247 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 HSFY1Q96LI6 401 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 CEP295NLQ96MC4 621 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 LRRC3BQ96PB8 259 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 C11orf70Q9BRQ4 267 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 DESI2Q9BSY9 194 aa10.3□□□□□ -0.76
CCDC171-203ENST00000449575 FBXO44Q9H4M3 255 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms