RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 SCML4Q8N228 414 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 SH3TC2Q8TF17 1288 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 CLEC4CQ8WTT0 213 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 RSAD2Q8WXG1 361 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 RIN2Q8WYP3 895 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 IRGQQ8WZA9 623 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 HAUS1Q96CS2 278 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 SLC2A13Q96QE2 648 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 SNRNP25Q9BV90 132 aaKnown RBP11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 FAM204AQ9H8W3 233 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 CSNK1G1Q9HCP0 422 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 PAK6Q9NQU5 681 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 RCOR3Q9P2K3 495 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 TIMM13Q9Y5L4 95 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 H0YGN5 161 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 APOL1O14791 398 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 CAPN9O14815 690 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 ATP9BO43861 1147 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 ZNF189O75820 626 aaPredicted RBP11□□□□□ -0.65
VIPAS39-203ENST00000448935 CD48P09326 243 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 HSPA1AP0DMV8 641 aaKnown RBP11□□□□□ -0.65
VIPAS39-203ENST00000448935 HSPA1BP0DMV9 641 aaKnown RBP11□□□□□ -0.65
VIPAS39-203ENST00000448935 ACTN2P35609 894 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 SULT1E1P49888 294 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 DAOAP59103 153 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 EIF3EP60228 445 aaKnown RBP11□□□□□ -0.65
VIPAS39-203ENST00000448935 YWHAHQ04917 246 aaPredicted RBP11□□□□□ -0.65
VIPAS39-203ENST00000448935 MORF4L2Q15014 288 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 NOMO1Q15155 1222 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 TRIP13Q15645 432 aaPredicted RBP11□□□□□ -0.65
VIPAS39-203ENST00000448935 PLEKHG4Q58EX7 1191 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 CD300LGQ6UXG3 332 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 C4orf22Q6V702 233 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 NT5C3BQ969T7 300 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 MYLPFQ96A32 169 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 FAF2Q96CS3 445 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 SLC9A7Q96T83 725 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 SMOQ99835 787 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 FAM118BQ9BPY3 351 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 UNC93B1Q9H1C4 597 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 TMBIM4Q9HC24 238 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 PCDH18Q9HCL0 1135 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 DMAP1Q9NPF5 467 aaPredicted RBP11□□□□□ -0.65
VIPAS39-203ENST00000448935 TMEM51Q9NW97 253 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 OGDHLQ9ULD0 1010 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 LRFN2Q9ULH4 789 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 TPX2Q9ULW0 747 aaKnown RBP11□□□□□ -0.65
VIPAS39-203ENST00000448935 AP4E1Q9UPM8 1137 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 PCDHB7Q9Y5E2 793 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 NFS1Q9Y697 457 aa11□□□□□ -0.65
VIPAS39-203ENST00000448935 BEST1O76090 585 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 F9P00740 461 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 RBP3P10745 1247 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 ARL4AP40617 200 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 VPS41P49754 854 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 BCAR1P56945 870 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 ROR1Q01973 937 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 P3H1Q32P28 736 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 PAN2Q504Q3 1202 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 DCAF6Q58WW2 860 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 ANKRD20A8PQ5CZ79 823 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 CLLU1OSQ5K130 101 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 AGBL2Q5U5Z8 902 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 SLC9A4Q6AI14 798 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 HIBCHQ6NVY1 386 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 BZW1Q7L1Q6 419 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 CCDC25Q86WR0 208 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 RELL1Q8IUW5 271 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 COLGALT2Q8IYK4 626 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 DCP1BQ8IZD4 617 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 ARFGAP2Q8N6H7 521 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 LINC01599Q8WXQ3 324 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 ATP6V1G3Q96LB4 118 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 NPY6RQ99463 290 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 RTP3Q9BQQ7 232 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 TMEM121Q9BTD3 319 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 ZBED2Q9BTP6 218 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 MRPL9Q9BYD2 267 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 ULBP1Q9BZM6 244 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 PHACTR1Q9C0D0 580 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 TBC1D13Q9NVG8 400 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 SHOC2Q9UQ13 582 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 TANC1Q9C0D5 1861 aa10.99□□□□□ -0.65
VIPAS39-203ENST00000448935 I3L4J1 428 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 ENPP3O14638 875 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 SYN3O14994 580 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 ZBED1O96006 694 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 IFNB1P01574 187 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 LTFP02788 710 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 IGFBP6P24592 240 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 L1CAMP32004 1257 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 OR1G1P47890 313 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 NR2C2P49116 596 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 ZNF135P52742 658 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 DEUP1Q05D60 604 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 ZNF844Q08AG5 666 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 GPS1Q13098 491 aa10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 ZC3H12AQ5D1E8 599 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 PPP6R3Q5H9R7 873 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-203ENST00000448935 BEND5Q7L4P6 421 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms