RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 TPGS1Q6ZTW0 290 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 SFTPA1Q8IWL2 248 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 TXNDC5Q8NBS9 432 aaKnown RBP20.69■□□□□ 0.9
VCP-203ENST00000448530 LRRC4Q9HBW1 653 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 POLMQ9NP87 494 aaPredicted RBP20.69■□□□□ 0.9
VCP-203ENST00000448530 DNAJC17Q9NVM6 304 aaKnown RBP20.69■□□□□ 0.9
VCP-203ENST00000448530 TSPAN16Q9UKR8 245 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 ZNF510Q9Y2H8 683 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.69■□□□□ 0.9
VCP-203ENST00000448530 XPO1O14980 1071 aaKnown RBP20.68■□□□□ 0.9
VCP-203ENST00000448530 PMM2O15305 246 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 P4HA2O15460 535 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 RHOBTB1O94844 696 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 FGFR1OPO95684 399 aaKnown RBP20.68■□□□□ 0.9
VCP-203ENST00000448530 ZBED1O96006 694 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 BMP6P22004 513 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 GBP1P32455 592 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 STX17P56962 302 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 YWHAGP61981 247 aaKnown RBP eCLIP20.68■□□□□ 0.9
VCP-203ENST00000448530 BST2Q10589 180 aaKnown RBP20.68■□□□□ 0.9
VCP-203ENST00000448530 EFEMP1Q12805 493 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 RAB41Q5JT25 222 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 C10orf76Q5T2E6 689 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 EMC10Q5UCC4 262 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 PRR23CQ6ZRP0 262 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 TRMT11Q7Z4G4 463 aaKnown RBP20.68■□□□□ 0.9
VCP-203ENST00000448530 C11orf74Q86VG3 221 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 PPM1KQ8N3J5 372 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 IL17RCQ8NAC3 791 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 ZC3H10Q96K80 434 aaKnown RBP20.68■□□□□ 0.9
VCP-203ENST00000448530 IPO9Q96P70 1041 aaKnown RBP20.68■□□□□ 0.9
VCP-203ENST00000448530 TPSD1Q9BZJ3 242 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 DCLK3Q9C098 648 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 ARRDC1-AS1Q9H2J1 176 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 PCDHB4Q9Y5E5 795 aa20.68■□□□□ 0.9
VCP-203ENST00000448530 ANTXRLA6NF34 631 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 GREM1O60565 184 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 STC2O76061 302 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 EPN2O95208 641 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 TYRP14679 529 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 KIR2DL1P43626 348 aaPredicted RBP20.67■□□□□ 0.9
VCP-203ENST00000448530 UBE2HP62256 183 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 PDE4CQ08493 712 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 PLK5Q496M5 336 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 TMEM270Q6UE05 265 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 SIX6OS1Q8N1H7 587 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 PHTF2Q8N3S3 785 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 TERB1Q8NA31 727 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 C12orf50Q8NA57 414 aaPredicted RBP20.67■□□□□ 0.9
VCP-203ENST00000448530 KCNV2Q8TDN2 545 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 CNOT6LQ96LI5 555 aaKnown RBP20.67■□□□□ 0.9
VCP-203ENST00000448530 MARK1Q9P0L2 795 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 MARCH2Q9P0N8 246 aa20.67■□□□□ 0.9
VCP-203ENST00000448530 BCCIPQ9P287 314 aaKnown RBP eCLIP20.67■□□□□ 0.9
VCP-203ENST00000448530 CACNA1AO00555 2505 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 DCHS1Q96JQ0 3298 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.66■□□□□ 0.9
VCP-203ENST00000448530 SGK1O00141 431 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 CACNG3O60359 315 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 HMBSP08397 361 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 PAEPP09466 180 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 SETSIPP0DME0 302 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 RASSF3Q86WH2 238 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 ZNF513Q8N8E2 541 aaPredicted RBP20.66■□□□□ 0.9
VCP-203ENST00000448530 TRIML1Q8N9V2 468 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 UBA3Q8TBC4 463 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 NETO1Q8TDF5 533 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 RTKNQ9BST9 563 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 SRRTQ9BXP5 876 aaKnown RBP20.66■□□□□ 0.9
VCP-203ENST00000448530 ULBP1Q9BZM6 244 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 CHMP5Q9NZZ3 219 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 PCDHGA5Q9Y5G8 931 aa20.66■□□□□ 0.9
VCP-203ENST00000448530 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.66■□□□□ 0.9
VCP-203ENST00000448530 MYO18AQ92614 2054 aaKnown RBP20.66■□□□□ 0.9
VCP-203ENST00000448530 O00370 1275 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 DCLK1O15075 740 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 CHKAP35790 457 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 KCNH2Q12809 1159 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 PM20D1Q6GTS8 502 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 SDE2Q6IQ49 451 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 TMEM92Q6UXU6 159 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 Q6ZNB5 142 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 UBR7Q8N806 425 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 MDGA1Q8NFP4 955 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 RNF139Q8WU17 664 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 BHMTQ93088 406 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 DUSP15Q9H1R2 295 aaPredicted RBP20.65■□□□□ 0.9
VCP-203ENST00000448530 ZDHHC4Q9NPG8 344 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 OLA1Q9NTK5 396 aaKnown RBP20.65■□□□□ 0.9
VCP-203ENST00000448530 INVSQ9Y283 1065 aa20.65■□□□□ 0.9
VCP-203ENST00000448530 SLC12A8A0AV02 714 aa20.64■□□□□ 0.89
VCP-203ENST00000448530 TULP2O00295 520 aa20.64■□□□□ 0.89
VCP-203ENST00000448530 ZBTB24O43167 697 aaPredicted RBP20.64■□□□□ 0.89
VCP-203ENST00000448530 AFPP02771 609 aaKnown RBP20.64■□□□□ 0.89
VCP-203ENST00000448530 CORO1AP31146 461 aaKnown RBP20.64■□□□□ 0.89
VCP-203ENST00000448530 DGKGP49619 791 aa20.64■□□□□ 0.89
VCP-203ENST00000448530 ATXN1P54253 815 aaKnown RBP20.64■□□□□ 0.89
VCP-203ENST00000448530 ADIGQ0VDE8 80 aa20.64■□□□□ 0.89
VCP-203ENST00000448530 STILQ15468 1287 aa20.64■□□□□ 0.89
VCP-203ENST00000448530 CAMK4Q16566 473 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms