RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 WNT6Q9Y6F9 365 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 NOTCH4Q99466 2003 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 BOD1L1Q8NFC6 3051 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 ANKHD1Q8IWZ3 2542 aaKnown RBP5.57□□□□□ -1.52
SDCBP-205ENST00000447267 PDZD2O15018 2839 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 A0A087X0B3 334 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 PNMA6EA0A0J9YXQ4 647 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 ESYT2A0FGR8 921 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 OTOL1A6NHN0 477 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-205ENST00000447267 GOLIM4O00461 696 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 TRDMT1O14717 391 aaKnown RBP5.57□□□□□ -1.52
SDCBP-205ENST00000447267 NADKO95544 446 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-205ENST00000447267 GOLGA8HP0CJ92 632 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 IMPDH2P12268 514 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 HOXD12P35452 270 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 DPP6P42658 865 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 AFF3P51826 1226 aaKnown RBP5.57□□□□□ -1.52
SDCBP-205ENST00000447267 NLRP11P59045 1033 aaKnown RBP5.57□□□□□ -1.52
SDCBP-205ENST00000447267 FCHO2Q0JRZ9 810 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 TEAD2Q15562 447 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 USP41Q3LFD5 358 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 ARL13BQ3SXY8 428 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 SBK1Q52WX2 424 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 FHL5Q5TD97 284 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 TMCO4Q5TGY1 634 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 FBXW10Q5XX13 1052 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 TMED8Q6PL24 325 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-205ENST00000447267 DBX2Q6ZNG2 339 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 STOX1Q6ZVD7 989 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 EAF2Q96CJ1 260 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-205ENST00000447267 MEIS3Q99687 375 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 TMEM175Q9BSA9 504 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 SLC25A18Q9H1K4 315 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.57□□□□□ -1.52
SDCBP-205ENST00000447267 PCDHB10Q9UN67 800 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 HIVEP3Q5T1R4 2406 aa5.57□□□□□ -1.52
SDCBP-205ENST00000447267 FN1P02751 2386 aaKnown RBP5.57□□□□□ -1.52
SDCBP-205ENST00000447267 WDR81Q562E7 1941 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 MED13Q9UHV7 2174 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 ABCB11O95342 1321 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 GSG1L2A8MUP6 293 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 PPFIA2O75334 1257 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 DBHP09172 617 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 MYL4P12829 197 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 LIMS1P48059 325 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 HSD17B4P51659 736 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 MFAP1P55081 439 aaKnown RBP5.56□□□□□ -1.52
SDCBP-205ENST00000447267 BNC1Q01954 994 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 DNAJC3Q13217 504 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 CDC37Q16543 378 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-205ENST00000447267 HLA-BQ31612 363 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 ITPRIPL2Q3MIP1 535 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 ZSCAN23Q3MJ62 389 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 FUT10Q6P4F1 479 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 CEP57Q86XR8 500 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 COLGALT2Q8IYK4 626 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 METTL13Q8N6R0 699 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 TRIML1Q8N9V2 468 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 URGCPQ8TCY9 931 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 KLHL6Q8WZ60 621 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 RNF34Q969K3 372 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 PKNOX2Q96KN3 472 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 PTCHD1Q96NR3 888 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 SEMA3CQ99985 751 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 KRTAP4-5Q9BYR2 181 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 DPH1Q9BZG8 443 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 PUS7LQ9H0K6 701 aaKnown RBP5.56□□□□□ -1.52
SDCBP-205ENST00000447267 SLITRK6Q9H5Y7 841 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 NOL6Q9H6R4 1146 aaKnown RBP5.56□□□□□ -1.52
SDCBP-205ENST00000447267 TRPV4Q9HBA0 871 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 DONSONQ9NYP3 566 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 SUSD2Q9UGT4 822 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 PCDH15Q96QU1 1955 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 BSNQ9UPA5 3926 aa5.56□□□□□ -1.52
SDCBP-205ENST00000447267 PLIN4Q96Q06 1357 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 FBN1P35555 2871 aaKnown RBP5.55□□□□□ -1.52
SDCBP-205ENST00000447267 PTPRCP08575 1304 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 PHLPP2Q6ZVD8 1323 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 CELSR1Q9NYQ6 3014 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 A0A1W2PQD8 194 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 ARHGAP10A1A4S6 786 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 ABLIM1O14639 778 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 KCNK3O14649 394 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 FLRT2O43155 660 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 MTSS1O43312 755 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 FIBPO43427 364 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 PPP1R11O60927 126 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-205ENST00000447267 LRG1P02750 347 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 CD3EP07766 207 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 POU2F2P09086 479 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 ENDOUP21128 410 aaKnown RBP5.55□□□□□ -1.52
SDCBP-205ENST00000447267 TACR1P25103 407 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 OR1D2P34982 312 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 ADD2P35612 726 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 ARL4AP40617 200 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 CASRP41180 1078 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 SCRN1Q12765 414 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 OS9Q13438 667 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-205ENST00000447267 MTX1Q13505 466 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 CLCA4Q14CN2 919 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms