RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 PAK5Q9P286 719 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 TIMM13Q9Y5L4 95 aaPredicted RBP16.31■□□□□ 0.2
SNX13-204ENST00000444712 A0A087WUV0 522 aaPredicted RBP16.3■□□□□ 0.2
SNX13-204ENST00000444712 ERICH4A6NGS2 130 aa16.3■□□□□ 0.2
SNX13-204ENST00000444712 CAPN9O14815 690 aa16.3■□□□□ 0.2
SNX13-204ENST00000444712 RPL22P35268 128 aaKnown RBP16.3■□□□□ 0.2
SNX13-204ENST00000444712 GDF10P55107 478 aa16.3■□□□□ 0.2
SNX13-204ENST00000444712 OVOS1Q6IE37 1185 aa16.3■□□□□ 0.2
SNX13-204ENST00000444712 BNIPLQ7Z465 357 aa16.3■□□□□ 0.2
SNX13-204ENST00000444712 UNC45BQ8IWX7 931 aa16.3■□□□□ 0.2
SNX13-204ENST00000444712 FRMD8Q9BZ67 464 aaPredicted RBP16.3■□□□□ 0.2
SNX13-204ENST00000444712 ULBP1Q9BZM6 244 aa16.3■□□□□ 0.2
SNX13-204ENST00000444712 TRPV6Q9H1D0 765 aa16.3■□□□□ 0.2
SNX13-204ENST00000444712 SAYSD1Q9NPB0 183 aa16.3■□□□□ 0.2
SNX13-204ENST00000444712 FZD10Q9ULW2 581 aa16.3■□□□□ 0.2
SNX13-204ENST00000444712 PCDHB8Q9UN66 801 aa16.3■□□□□ 0.2
SNX13-204ENST00000444712 NLRC5Q86WI3 1866 aa16.3■□□□□ 0.2
SNX13-204ENST00000444712 TMEM189-UBE2V1I3L0A0 370 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 ZBED1O96006 694 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 TFE3P19532 575 aaPredicted RBP16.29■□□□□ 0.2
SNX13-204ENST00000444712 FAM189BP81408 668 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 BFSP2Q13515 415 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 HIF1AQ16665 826 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 CA9Q16790 459 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 C1orf228Q6PIY5 440 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 TRAF7Q6Q0C0 670 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 FAM71DQ8N9W8 422 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 EPS8L3Q8TE67 593 aaKnown RBP16.29■□□□□ 0.2
SNX13-204ENST00000444712 MYLPFQ96A32 169 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 DMAP1Q9NPF5 467 aaPredicted RBP16.29■□□□□ 0.2
SNX13-204ENST00000444712 SAGE1Q9NXZ1 904 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 H3BRJ5 948 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 M0QYT0 321 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 F9P00740 461 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 IBSPP21815 317 aaPredicted RBP16.29■□□□□ 0.2
SNX13-204ENST00000444712 IGFBP6P24592 240 aaPredicted RBP16.29■□□□□ 0.2
SNX13-204ENST00000444712 BRCC3P46736 316 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 DEUP1Q05D60 604 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 ZSCAN26Q16670 478 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 TNFAIP8L3Q5GJ75 292 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 EFHC2Q5JST6 749 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 NPNTQ6UXI9 565 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 C4orf50Q6ZRC1 276 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 ZC3H18Q86VM9 953 aaKnown RBP16.29■□□□□ 0.2
SNX13-204ENST00000444712 NAT8LQ8N9F0 302 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 UHMK1Q8TAS1 419 aaKnown RBP16.29■□□□□ 0.2
SNX13-204ENST00000444712 CPT1BQ92523 772 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 PGAP3Q96FM1 320 aaPredicted RBP16.29■□□□□ 0.2
SNX13-204ENST00000444712 DNAJC17Q9NVM6 304 aaKnown RBP16.29■□□□□ 0.2
SNX13-204ENST00000444712 SLC12A6Q9UHW9 1150 aa16.29■□□□□ 0.2
SNX13-204ENST00000444712 SF3B1O75533 1304 aaKnown RBP eCLIP16.29■□□□□ 0.25e-6■■■■■ 70.3
SNX13-204ENST00000444712 HACD1B0YJ81 288 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 ALOX15BO15296 676 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 LTFP02788 710 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 SELPP16109 830 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 TSHRP16473 764 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 ZNF135P52742 658 aaPredicted RBP16.28■□□□□ 0.2
SNX13-204ENST00000444712 AUHQ13825 339 aaKnown RBP16.28■□□□□ 0.2
SNX13-204ENST00000444712 CCDC142Q17RM4 750 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 SKIDA1Q1XH10 827 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 NOMO2Q5JPE7 1267 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 CD300LGQ6UXG3 332 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 LRRC8DQ7L1W4 858 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 CCDC185Q8N715 623 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 ZMIZ2Q8NF64 920 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 NTAN1Q96AB6 310 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 CSPG4P5Q96PW8 444 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 KCTD15Q96SI1 283 aaPredicted RBP16.28■□□□□ 0.2
SNX13-204ENST00000444712 FERMT1Q9BQL6 677 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 RTP3Q9BQQ7 232 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 ELAC1Q9H777 363 aaKnown RBP16.28■□□□□ 0.2
SNX13-204ENST00000444712 HEY1Q9Y5J3 304 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 COL4A4P53420 1690 aaPredicted RBP16.28■□□□□ 0.2
SNX13-204ENST00000444712 SMIM23A6NLE4 172 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 CHADO15335 359 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 TRAPPC3O43617 180 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 CDH16O75309 829 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 PHBP35232 272 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 NDUFV1P49821 464 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 BASP1P80723 227 aaKnown RBP16.28■□□□□ 0.2
SNX13-204ENST00000444712 DSC1Q08554 894 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 LRRC31Q6UY01 552 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 FAM131BQ86XD5 332 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 PDIK1LQ8N165 341 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 C9orf72Q96LT7 481 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 FAM193BQ96PV7 902 aaPredicted RBP16.28■□□□□ 0.2
SNX13-204ENST00000444712 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.28■□□□□ 0.2
SNX13-204ENST00000444712 TMEM161AQ9NX61 479 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 MTMR10Q9NXD2 777 aa16.28■□□□□ 0.2
SNX13-204ENST00000444712 HHLA1C9JL84 531 aa16.27■□□□□ 0.2
SNX13-204ENST00000444712 I3L4J1 428 aa16.27■□□□□ 0.2
SNX13-204ENST00000444712 KCNN4O15554 427 aa16.27■□□□□ 0.2
SNX13-204ENST00000444712 LSP1P33241 339 aa16.27■□□□□ 0.2
SNX13-204ENST00000444712 ATXN1P54253 815 aaKnown RBP16.27■□□□□ 0.2
SNX13-204ENST00000444712 YWHAHQ04917 246 aaPredicted RBP16.27■□□□□ 0.2
SNX13-204ENST00000444712 RNASELQ05823 741 aaKnown RBP16.27■□□□□ 0.2
SNX13-204ENST00000444712 PDIA2Q13087 525 aaKnown RBP16.27■□□□□ 0.2
SNX13-204ENST00000444712 ARL13BQ3SXY8 428 aa16.27■□□□□ 0.2
SNX13-204ENST00000444712 PAN2Q504Q3 1202 aaKnown RBP16.27■□□□□ 0.2
SNX13-204ENST00000444712 SLC45A4Q5BKX6 768 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms