RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 CCDC26Q8TAB7 109 aa9.9□□□□□ -0.82
SMPD4P1-203ENST00000443839 ZNF461Q8TAF7 563 aa9.9□□□□□ -0.82
SMPD4P1-203ENST00000443839 HDAC7Q8WUI4 952 aa9.9□□□□□ -0.82
SMPD4P1-203ENST00000443839 AUTS2Q8WXX7 1259 aa9.9□□□□□ -0.82
SMPD4P1-203ENST00000443839 CLP1Q92989 425 aaKnown RBP9.9□□□□□ -0.82
SMPD4P1-203ENST00000443839 PNKPQ96T60 521 aa9.9□□□□□ -0.82
SMPD4P1-203ENST00000443839 HERPUD2Q9BSE4 406 aa9.9□□□□□ -0.82
SMPD4P1-203ENST00000443839 SNRNP25Q9BV90 132 aaKnown RBP9.9□□□□□ -0.82
SMPD4P1-203ENST00000443839 PLEKHA4Q9H4M7 779 aa9.9□□□□□ -0.82
SMPD4P1-203ENST00000443839 GPATCH2LQ9NWQ4 482 aa9.9□□□□□ -0.82
SMPD4P1-203ENST00000443839 DDIT4Q9NX09 232 aa9.9□□□□□ -0.82
SMPD4P1-203ENST00000443839 CALCOCO1Q9P1Z2 691 aa9.9□□□□□ -0.82
SMPD4P1-203ENST00000443839 AFF4Q9UHB7 1163 aaKnown RBP9.9□□□□□ -0.82
SMPD4P1-203ENST00000443839 LCHNA4D1U4 455 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 C3orf70A6NLC5 250 aaPredicted RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 MDM4O15151 490 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 RAD51CO43502 376 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 RTN3O95197 1032 aaPredicted RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 TUBBP07437 444 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 YWHAQP27348 245 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 TUFMP49411 452 aaKnown RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 DYNLT1P63172 113 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 DR1Q01658 176 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 PDK2Q15119 407 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 SIX1Q15475 284 aaPredicted RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 ZC3H12AQ5D1E8 599 aaKnown RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 ERMARDQ5T6L9 678 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 OTUD1Q5VV17 481 aaPredicted RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 TPGS2Q68CL5 300 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 SND1Q7KZF4 910 aaKnown RBP eCLIP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 MON1AQ86VX9 555 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 ARHGAP18Q8N392 663 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 CCDC185Q8N715 623 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 C1orf54Q8WWF1 131 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 FBXO32Q969P5 355 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 SPATA17Q96L03 361 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 HINFPQ9BQA5 517 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 MAK16Q9BXY0 300 aaKnown RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 HOMER3Q9NSC5 361 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 ABCC13Q9NSE7 274 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 PIGVQ9NUD9 493 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 ARGLU1Q9NWB6 273 aaPredicted RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 STIM2Q9P246 746 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 AP4E1Q9UPM8 1137 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 SCML2Q9UQR0 700 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 A0A1W2PQH9 124 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 PRRG1O14668 218 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 ZMYND10O75800 440 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 HEXIM1O94992 359 aaKnown RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 F9P00740 461 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 LINC00271P0C7V0 271 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 ATF2P15336 505 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 MCM3P25205 808 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 CTNNB1P35222 781 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 USP46P62068 366 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 CREMQ03060 361 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 SNX1Q13596 522 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 CCDC137Q6PK04 289 aaKnown RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 BEND5Q7L4P6 421 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 RFX6Q8HWS3 928 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 CCDC105Q8IYK2 499 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 SP7Q8TDD2 431 aaPredicted RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 GIPC2Q8TF65 315 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 RNF139Q8WU17 664 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 ATG4AQ8WYN0 398 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 DHX35Q9H5Z1 703 aaKnown RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 CYP4F11Q9HBI6 524 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.89□□□□□ -0.831e-6■■■■■ 27
SMPD4P1-203ENST00000443839 GMIPQ9P107 970 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 DMGDHQ9UI17 866 aaKnown RBP9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 SSX2IPQ9Y2D8 614 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 EFR3BQ9Y2G0 817 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 CDH23Q9H251 3354 aa9.89□□□□□ -0.83
SMPD4P1-203ENST00000443839 ZNF638Q14966 1978 aaKnown RBP9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 CCDC85CA6NKD9 419 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 TTI1O43156 1089 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 CST8O60676 142 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 ENDOD1O94919 500 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 ABLIM3O94929 683 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 ATF6P18850 670 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 ELF1P32519 619 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 FNTAP49354 379 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 VSNL1P62760 191 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 GUCY2DQ02846 1103 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 ADCY2Q08462 1091 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 RAB33AQ14088 237 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 DPYSL3Q14195 570 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 CYP1B1Q16678 543 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 EFHC2Q5JST6 749 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 WDR93Q6P2C0 686 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 TMC7Q7Z402 723 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 BNIPLQ7Z465 357 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 SCD5Q86SK9 330 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 TAC4Q86UU9 113 aa9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 C12orf50Q8NA57 414 aaPredicted RBP9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 DQX1Q8TE96 717 aaKnown RBP9.88□□□□□ -0.83
SMPD4P1-203ENST00000443839 RNF34Q969K3 372 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms