RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 PMLP29590 882 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 ERFP50548 548 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 SESN3P58005 492 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 DPYSL3Q14195 570 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 E2F5Q15329 346 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 NDUFAF2Q8N183 169 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 LGMNQ99538 433 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 LBHD1Q9BQE6 289 aaPredicted RBP10.97□□□□□ -0.65
CALD1-210ENST00000443197 FOXP3Q9BZS1 431 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 TSR3Q9UJK0 312 aaKnown RBP10.97□□□□□ -0.65
CALD1-210ENST00000443197 CDK5RAP2Q96SN8 1893 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 TMEM88BA6NKF7 163 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 PPFIA2O75334 1257 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 LTFP02788 710 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 ALDH2P05091 517 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 OGDHQ02218 1023 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 ANKRD20A8PQ5CZ79 823 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 CHSY1Q86X52 802 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 FBXO32Q969P5 355 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 ZMAT2Q96NC0 199 aaKnown RBP10.97□□□□□ -0.65
CALD1-210ENST00000443197 RNF157Q96PX1 679 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 KCNK16Q96T55 309 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 SENP6Q9GZR1 1112 aaPredicted RBP10.97□□□□□ -0.65
CALD1-210ENST00000443197 TKTL2Q9H0I9 626 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 ATXN3LQ9H3M9 355 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 NPHS2Q9NP85 383 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 NR2E3Q9Y5X4 410 aa10.97□□□□□ -0.65
CALD1-210ENST00000443197 LOC102724159A0A0B4J2E5 919 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 TBKBP1A7MCY6 615 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 PRRG1O14668 218 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 GIPC1O14908 333 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 TNFRSF8P28908 595 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 PWP2Q15269 919 aaKnown RBP10.96□□□□□ -0.65
CALD1-210ENST00000443197 MAPRE1Q15691 268 aaKnown RBP10.96□□□□□ -0.65
CALD1-210ENST00000443197 PKN2Q16513 984 aaKnown RBP10.96□□□□□ -0.65
CALD1-210ENST00000443197 SOWAHAQ2M3V2 549 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 LRRC38Q5VT99 294 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 SRLQ86TD4 932 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 ART4Q93070 314 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 STAMBPL1Q96FJ0 436 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 SMARCD1Q96GM5 515 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 SNX27Q96L92 541 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 PPP1R36Q96LQ0 422 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 RPRD1AQ96P16 312 aaPredicted RBP10.96□□□□□ -0.65
CALD1-210ENST00000443197 FAM111AQ96PZ2 611 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 SGIP1Q9BQI5 828 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 TRIM55Q9BYV6 548 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 POPDC2Q9HBU9 364 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 PPARGC1AQ9UBK2 798 aaKnown RBP10.96□□□□□ -0.65
CALD1-210ENST00000443197 ANKRD31Q8N7Z5 1873 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 COL4A5P29400 1685 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 NCF2P19878 526 aaPredicted RBP10.96□□□□□ -0.65
CALD1-210ENST00000443197 GPD2P43304 727 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 GPATCH11Q8N954 259 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 IFT43Q96FT9 208 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 MS4A4AQ96JQ5 239 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 GABRQQ9UN88 632 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 ATP11BQ9Y2G3 1177 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.96□□□□□ -0.65
CALD1-210ENST00000443197 SBF2Q86WG5 1849 aa10.96□□□□□ -0.65
CALD1-210ENST00000443197 MYO9BQ13459 2157 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 MYBPHLA2RUH7 354 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 MEFVO15553 781 aaPredicted RBP10.96□□□□□ -0.66
CALD1-210ENST00000443197 STAMBPO95630 424 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 SKIP12755 728 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 RASSF2P50749 326 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 IL31Q6EBC2 164 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 BBS12Q6ZW61 710 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 SPATA21Q7Z572 469 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 TADA2BQ86TJ2 420 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 PYROXD2Q8N2H3 581 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 ALLCQ8N6M5 410 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 CCNYL1Q8N7R7 359 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 SKA2Q8WVK7 121 aaPredicted RBP10.96□□□□□ -0.66
CALD1-210ENST00000443197 HAUS2Q9NVX0 235 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 MORF4L1Q9UBU8 362 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 PCDHGC3Q9UN70 934 aa10.96□□□□□ -0.66
CALD1-210ENST00000443197 GOLGA8TH3BQL2 631 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 IL1R2P27930 398 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 CDKN2BP42772 138 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 DRG2P55039 364 aaKnown RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 SH3TC2Q8TF17 1288 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 RMDN1Q96DB5 314 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 LRRC37BQ96QE4 947 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 NUDCD1Q96RS6 583 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 XYLT2Q9H1B5 865 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 C20orf96Q9NUD7 363 aaPredicted RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 IPO11Q9UI26 975 aaKnown RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 SHOC2Q9UQ13 582 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 RREB1Q92766 1687 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 PRRC2BQ5JSZ5 2229 aaKnown RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 SOCS7O14512 581 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 PAPSS1O43252 624 aaPredicted RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 ENDOD1O94919 500 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 PRAMEP78395 509 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 GBE1Q04446 702 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 ZNF235Q14590 738 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 FASTKD3Q14CZ7 662 aaKnown RBP10.95□□□□□ -0.66
CALD1-210ENST00000443197 SMC1BQ8NDV3 1235 aa10.95□□□□□ -0.66
CALD1-210ENST00000443197 ARMC2Q8NEN0 867 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms