RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 EMC10Q5UCC4 262 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 UNQ6494/PRO21346Q6UXR6 183 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 CLEC20AQ6ZU45 233 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 CCDC186Q7Z3E2 898 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 TMEM25Q86YD3 366 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 CHPFQ8IZ52 775 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 ARHGAP18Q8N392 663 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 NAT16Q8N8M0 369 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 RLN3Q8WXF3 142 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 FOXJ1Q92949 421 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 CYFIP2Q96F07 1278 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 NIF3L1Q9GZT8 377 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 SDCBP2Q9H190 292 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 MBD1Q9UIS9 605 aaPredicted RBP14.55□□□□□ -0.08
PTPRE-203ENST00000442830 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.54□□□□□ -0.08
PTPRE-203ENST00000442830 A0A1W2PQD8 194 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 PATE3B3GLJ2 98 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 STX10O60499 249 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 CFIP05156 583 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 GABRG2P18507 467 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 ACO1P21399 889 aaKnown RBP14.54□□□□□ -0.08
PTPRE-203ENST00000442830 DGKGP49619 791 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 COG7P83436 770 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 MESP2Q0VG99 397 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 STARD3Q14849 445 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 UAP1L1Q3KQV9 507 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 SFTPA1Q8IWL2 248 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 IPO4Q8TEX9 1081 aaKnown RBP14.54□□□□□ -0.08
PTPRE-203ENST00000442830 UCMAQ8WVF2 138 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 GABRG3Q99928 467 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 ADAM33Q9BZ11 813 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 FAM49BQ9NUQ9 324 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTPRE-203ENST00000442830 CLIC5Q9NZA1 410 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 CALCOCO1Q9P1Z2 691 aa14.54□□□□□ -0.08
PTPRE-203ENST00000442830 OPHN1O60890 802 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 NDUFS2O75306 463 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 BEST1O76090 585 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 RHOBTB3O94955 611 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 RARGP13631 454 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 GNSP15586 552 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 PFKFB1P16118 471 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 NR2F2P24468 414 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 ADORA2BP29275 332 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 PSMC2P35998 433 aaKnown RBP14.53□□□□□ -0.08
PTPRE-203ENST00000442830 PTGER3P43115 390 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 KIF11P52732 1056 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 DLG4P78352 724 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 KRT85P78386 507 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 ZNF33AQ06730 810 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 FOXC1Q12948 553 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 SLC14A1Q13336 389 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 C10orf120Q5SQS8 335 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 FOXD4L5Q5VV16 416 aaPredicted RBP14.53□□□□□ -0.08
PTPRE-203ENST00000442830 METTL3Q86U44 580 aaKnown RBP14.53□□□□□ -0.08
PTPRE-203ENST00000442830 GRAMD1CQ8IYS0 662 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 C12orf29Q8N999 325 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 FOXD4L4Q8WXT5 416 aaPredicted RBP14.53□□□□□ -0.08
PTPRE-203ENST00000442830 UBXN6Q9BZV1 441 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 ZDHHC5Q9C0B5 715 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 TMEM8AQ9HCN3 771 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 STRIP2Q9ULQ0 834 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 SLC27A6Q9Y2P4 619 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 NFE2L3Q9Y4A8 694 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 ATP6V1DQ9Y5K8 247 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 CHD6Q8TD26 2715 aa14.53□□□□□ -0.08
PTPRE-203ENST00000442830 CFAP47Q6ZTR5 3102 aa14.52□□□□□ -0.08
PTPRE-203ENST00000442830 IGHV1OR15-9A0A0B4J2B8 117 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 A0A1W2PQF6 199 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 HHLA1C9JL84 531 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 CYP26A1O43174 497 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 GREM1O60565 184 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 CILPO75339 1184 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 CYBBP04839 570 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 ITPKAP23677 461 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 SYKP43405 635 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 DNM1Q05193 864 aaKnown RBP14.52□□□□□ -0.09
PTPRE-203ENST00000442830 SEMA3BQ13214 749 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 EIF4HQ15056 248 aaKnown RBP14.52□□□□□ -0.09
PTPRE-203ENST00000442830 FOXD4L6Q3SYB3 417 aaPredicted RBP14.52□□□□□ -0.09
PTPRE-203ENST00000442830 WDR45BQ5MNZ6 344 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 EGFLAMQ63HQ2 1017 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 FOXD4L3Q6VB84 417 aaPredicted RBP14.52□□□□□ -0.09
PTPRE-203ENST00000442830 Q6ZNB5 142 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 TPGS1Q6ZTW0 290 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 ARMCX6Q7L4S7 300 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 FAM186BQ8IYM0 893 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 GUF1Q8N442 669 aaKnown RBP14.52□□□□□ -0.09
PTPRE-203ENST00000442830 KDF1Q8NAX2 398 aaPredicted RBP14.52□□□□□ -0.09
PTPRE-203ENST00000442830 SPATA32Q96LK8 384 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 DUSP16Q9BY84 665 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 CAPN10Q9HC96 672 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 HMGXB4Q9UGU5 601 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 NAGPAQ9UK23 515 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 FBXO10Q9UK96 956 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 NEUROG3Q9Y4Z2 214 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 PCDH15Q96QU1 1955 aa14.52□□□□□ -0.09
PTPRE-203ENST00000442830 ADAMTS9Q9P2N4 1935 aa14.51□□□□□ -0.09
PTPRE-203ENST00000442830 A0A1W2PQH9 124 aa14.51□□□□□ -0.09
PTPRE-203ENST00000442830 GIPC1O14908 333 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms