RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 MBD6Q96DN6 1003 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 CCDC34Q96HJ3 373 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 FUZQ9BT04 418 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 HERC2P3Q9BVR0 1158 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 NSUN3Q9H649 340 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 CCDC134Q9H6E4 229 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 YY1AP1Q9H869 796 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 BRF2Q9HAW0 419 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZCCHC17Q9NP64 241 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 SEPT11Q9NVA2 429 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 NTMQ9P121 344 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 CCDC195A0A1B0GUA6 201 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 hCG_1807616A0A1W2PRN6 198 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 PABPN1LA6NDY0 278 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 PRR5-ARHGAP8B1AHC4 643 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 GJB3O75712 270 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 LARGE1O95461 756 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 SPATA31D3P0C874 917 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 TAL1P17542 331 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 GCSHP23434 173 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 RBL1P28749 1068 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 ADORA2AP29274 412 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 PAFAH1B1P43034 410 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 CD151P48509 253 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 RNASE9P60153 205 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 ROR1Q01973 937 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZNF844Q08AG5 666 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 TBCCQ15814 346 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 NFIL3Q16649 462 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 PRICKLE4Q2TBC4 344 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 RILPL1Q5EBL4 403 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 ARHGAP40Q5TG30 622 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 RGS7BPQ6MZT1 257 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 SLC22A25Q6T423 547 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 ATF7IPQ6VMQ6 1270 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 SPATA31D4Q6ZUB0 917 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 CBLL1Q75N03 491 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 UBE2Q1Q7Z7E8 422 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 FAM83AQ86UY5 434 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZNF713Q8N859 430 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZNF483Q8TF39 744 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 NSUN4Q96CB9 384 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 SLF1Q9BQI6 1058 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 CPPED1Q9BRF8 314 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 PTDSS2Q9BVG9 487 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 SLC25A18Q9H1K4 315 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 TTYH1Q9H313 450 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 EIF2B3Q9NR50 452 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 PLA2G3Q9NZ20 509 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 CTTNBP2NLQ9P2B4 639 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 PCDHB7Q9Y5E2 793 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 PSAT1Q9Y617 370 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 AATKQ6ZMQ8 1374 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 CCDC78A2IDD5 438 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 ERICH4A6NGS2 130 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 M0QYT0 321 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 PEX12O00623 359 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 CLEC3BP05452 202 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 CASQ1P31415 396 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 UQCRC1P31930 480 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 GATMP50440 423 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 FAM3BP58499 235 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 HMGN5P82970 282 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 CCNIQ14094 377 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 DCTN1Q14203 1278 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 BECN1Q14457 450 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 TMEM196Q5HYL7 178 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 CERCAMQ5T4B2 595 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 KIAA1614Q5VZ46 1190 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 FAM111BQ6SJ93 734 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 CLEC9AQ6UXN8 241 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 PRR23BQ6ZRT6 265 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 SYT12Q8IV01 421 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 RHOT2Q8IXI1 618 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 FSTL5Q8N475 847 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 LRRC71Q8N4P6 559 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 CFAP53Q96M91 514 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 NEU1Q99519 415 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 DPYSL5Q9BPU6 564 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 EPB41L4BQ9H329 900 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 STN1Q9H668 368 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 HSFX1Q9UBD0 423 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 BAG5Q9UL15 447 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 NFU1Q9UMS0 254 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 PCDHGB4Q9UN71 923 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZBTB1Q9Y2K1 713 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 SLC27A6Q9Y2P4 619 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 RIMBP3CA6NJZ7 1639 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 RIMBP3BA6NNM3 1639 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 RIMBP3Q9UFD9 1639 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 COL15A1P39059 1388 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 SUN1O94901 812 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 PEPDP12955 493 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 EPHA8P29322 1005 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 PIK3CAP42336 1068 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZNF132P52740 706 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 RNASELQ05823 741 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 DCTN2Q13561 401 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 SEC23BQ15437 767 aa4.47□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZNF568Q3ZCX4 644 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms