RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 ZNRF3Q9ULT6 936 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 MYH15Q9Y2K3 1946 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 LOC100653049A0A140TA62 436 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 PIK3CDO00329 1044 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 DGKIO75912 1065 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 TNFAIP8O95379 198 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 CCNA2P20248 432 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 TTKP33981 857 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 POLR2LP62875 67 aaKnown RBP6.87□□□□□ -1.31
USP46-201ENST00000441222 TRAF2Q12933 501 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 TRIM28Q13263 835 aaKnown RBP6.87□□□□□ -1.31
USP46-201ENST00000441222 FBXW10Q5XX13 1052 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 SLC44A2Q8IWA5 706 aaPredicted RBP6.87□□□□□ -1.31
USP46-201ENST00000441222 FLCNQ8NFG4 579 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 RORBQ92753 470 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 FBXO32Q969P5 355 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 CATSPER2Q96P56 530 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 WDR24Q96S15 920 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 SRP68Q9UHB9 627 aaKnown RBP6.87□□□□□ -1.31
USP46-201ENST00000441222 PSME2Q9UL46 239 aa6.87□□□□□ -1.31
USP46-201ENST00000441222 HSMCR30P0CW71 290 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 VDRP11473 427 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 CETPP11597 493 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 CRABP2P29373 138 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 SKIV2L2P42285 1042 aaKnown RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 AP1S2P56377 157 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 CUL2Q13617 745 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 SMAD1Q15797 465 aaKnown RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 GPRC5AQ8NFJ5 357 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 SERAC1Q96JX3 654 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 RPRD1AQ96P16 312 aaPredicted RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 CRAMP1Q96RY5 1269 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 TRIM51Q9BSJ1 452 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 PRDM16Q9HAZ2 1276 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 NOD2Q9HC29 1040 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 UBAP1Q9NZ09 502 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 PHTF1Q9UMS5 762 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 POLR1DQ9Y2S0 133 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 V9GYQ6 96 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 BCLAF3A2AJT9 711 aaKnown RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 KLHL18O94889 574 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 ENO2P09104 434 aaPredicted RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 UBTFL6P0CB48 400 aaPredicted RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 GZMAP12544 262 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 RARGP13631 454 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 NQO1P15559 274 aaKnown RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 HMGCS2P54868 508 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 MCL1Q07820 350 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 PRKAA1Q13131 559 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 HLA-DQA1Q5Y7H0 255 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 CYP3A43Q9HB55 503 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 NYAP2Q9P242 653 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 ANKRD6Q9Y2G4 727 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 ZNF682O95780 498 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 TFE3P19532 575 aaPredicted RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 POU1F1P28069 291 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 SERPINB5P36952 375 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 EPHB3P54753 998 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 ELAVL2Q12926 359 aaKnown RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 BAATQ14032 418 aaPredicted RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 PTPAQ15257 358 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 SMTNL2Q2TAL5 461 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 ZNF484Q5JVG2 852 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 RSBN1Q5VWQ0 802 aaPredicted RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 FBXO42Q6P3S6 717 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 KDM7AQ6ZMT4 941 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 SLC13A5Q86YT5 568 aaPredicted RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 CAMKK1Q8N5S9 505 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.86□□□□□ -1.31
USP46-201ENST00000441222 B3GALNT2Q8NCR0 500 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 C1orf131Q8NDD1 294 aaKnown RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 MAGEB10Q96LZ2 347 aaPredicted RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 NSMCE2Q96MF7 247 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 QRFPRQ96P65 431 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 C9orf16Q9BUW7 83 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 SENP2Q9HC62 589 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 ZCCHC17Q9NP64 241 aaKnown RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 THG1LQ9NWX6 298 aaKnown RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 COQ6Q9Y2Z9 468 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 SNX13Q9Y5W8 968 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 TBKBP1A7MCY6 615 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 GRAP2O75791 330 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 ATG7O95352 703 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 PCNAP12004 261 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 TARSP26639 723 aaKnown RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 NAMPTP43490 491 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 CORO7P57737 925 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 NR6A1Q15406 480 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 TCEA2Q15560 299 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 DGUOKQ16854 277 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 MZT2BQ6NZ67 158 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 COMMD2Q86X83 199 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 LRRC71Q8N4P6 559 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 SRBD1Q8N5C6 995 aaKnown RBP6.86□□□□□ -1.31
USP46-201ENST00000441222 SH2D3CQ8N5H7 860 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 KYQ8NBH2 561 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 SLC44A5Q8NCS7 719 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 CHAMP1Q96JM3 812 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 ZIM3Q96PE6 472 aa6.86□□□□□ -1.31
USP46-201ENST00000441222 PRKD2Q9BZL6 878 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms