RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 NCOA4Q13772 614 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 BBS9Q3SYG4 887 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 RGMBQ6NW40 437 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 PGM2L1Q6PCE3 622 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 FBXL19Q6PCT2 694 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 ANO5Q75V66 913 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 PDIK1LQ8N165 341 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 LRRC43Q8N309 656 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 RDM1Q8NG50 284 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 DIS3LQ8TF46 1054 aaKnown RBP12.33□□□□□ -0.44
LTBR-203ENST00000441074 ZFRQ96KR1 1074 aaKnown RBP12.33□□□□□ -0.44
LTBR-203ENST00000441074 KIFC3Q9BVG8 833 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 RBM38Q9H0Z9 239 aaKnown RBP12.33□□□□□ -0.44
LTBR-203ENST00000441074 TOPORSQ9NS56 1045 aaPredicted RBP12.33□□□□□ -0.44
LTBR-203ENST00000441074 SIRPGQ9P1W8 387 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 AGTPBP1Q9UPW5 1226 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 COL11A1P12107 1806 aaPredicted RBP12.33□□□□□ -0.44
LTBR-203ENST00000441074 SDR42E2A6NKP2 422 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 TTLL13PA6NNM8 815 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 WDR64B1ANS9 1081 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 C6orf222P0C671 652 aaPredicted RBP12.33□□□□□ -0.44
LTBR-203ENST00000441074 KRT76Q01546 638 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 TRIP10Q15642 601 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 TEX44Q53QW1 395 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 XKR9Q5GH70 373 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 TFDP3Q5H9I0 405 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 PHF13Q86YI8 300 aaPredicted RBP12.33□□□□□ -0.44
LTBR-203ENST00000441074 CRLF3Q8IUI8 442 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 GPD1LQ8N335 351 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 SHKBP1Q8TBC3 707 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 RAB3IL1Q8TBN0 382 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 ELMO3Q96BJ8 720 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 RILPQ96NA2 401 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 KMT5AQ9NQR1 393 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 KCNH4Q9UQ05 1017 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 DMTF1Q9Y222 760 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 PLLPQ9Y342 182 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 OTOFQ9HC10 1997 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 HTTP42858 3142 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 UNCXA6NJT0 531 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 FDFT1P37268 417 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 NOMO3P69849 1222 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 SLC25A3Q00325 362 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 BTKQ06187 659 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 C1QBPQ07021 282 aaKnown RBP12.32□□□□□ -0.44
LTBR-203ENST00000441074 WASHC5Q12768 1159 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 PPIL2Q13356 520 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 SNAPC2Q13487 334 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 DCTN2Q13561 401 aaKnown RBP12.32□□□□□ -0.44
LTBR-203ENST00000441074 UBAP2LQ14157 1087 aaKnown RBP12.32□□□□□ -0.44
LTBR-203ENST00000441074 LY6KQ17RY6 165 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 NADK2Q4G0N4 442 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 WDR44Q5JSH3 913 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 C1QTNF12Q5T7M4 302 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 C15orf39Q6ZRI6 1047 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 CDHR3Q6ZTQ4 885 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 TMC7Q7Z402 723 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 ZNF554Q86TJ5 538 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 CCDC60Q8IWA6 550 aaPredicted RBP12.32□□□□□ -0.44
LTBR-203ENST00000441074 GAB3Q8WWW8 586 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 POMGNT1Q8WZA1 660 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 GFM2Q969S9 779 aaKnown RBP12.32□□□□□ -0.44
LTBR-203ENST00000441074 NTPCRQ9BSD7 190 aaKnown RBP12.32□□□□□ -0.44
LTBR-203ENST00000441074 MRPS26Q9BYN8 205 aaKnown RBP12.32□□□□□ -0.44
LTBR-203ENST00000441074 SMYD3Q9H7B4 428 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 PARVAQ9NVD7 372 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 MAD1L1Q9Y6D9 718 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 IVNS1ABPQ9Y6Y0 642 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 ARHGAP10A1A4S6 786 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 MEI4A8MW99 385 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 H0YCG3 227 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 CXCL11O14625 94 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 TCF4P15884 667 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 EMP3P54852 163 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 DEFB115Q30KQ5 88 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 OGFRL1Q5TC84 451 aaPredicted RBP12.32□□□□□ -0.44
LTBR-203ENST00000441074 TTC39BQ5VTQ0 682 aaPredicted RBP12.32□□□□□ -0.44
LTBR-203ENST00000441074 RIOX2Q8IUF8 465 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 ABRAQ8N0Z2 381 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 NLRP4Q96MN2 994 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 PI4K2AQ9BTU6 479 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 MECRQ9BV79 373 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 Q9H521 79 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 JPH1Q9HDC5 661 aaPredicted RBP12.32□□□□□ -0.44
LTBR-203ENST00000441074 LZTS1Q9Y250 596 aa12.32□□□□□ -0.44
LTBR-203ENST00000441074 HBS1LQ9Y450 684 aaKnown RBP12.32□□□□□ -0.44
LTBR-203ENST00000441074 TCRBV9S1A1TA0A576 114 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 SNNO75324 88 aaPredicted RBP12.31□□□□□ -0.44
LTBR-203ENST00000441074 SPAG6O75602 509 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 KLHL2O95198 593 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 RAG1P15918 1043 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 RPL22P35268 128 aaKnown RBP12.31□□□□□ -0.44
LTBR-203ENST00000441074 CDKN2BP42772 138 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 ACTR2P61160 394 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 TLR1Q15399 786 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 CHI3L2Q15782 390 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 KBTBD12Q3ZCT8 623 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 BRDTQ58F21 947 aaPredicted RBP12.31□□□□□ -0.44
LTBR-203ENST00000441074 CES4AQ5XG92 561 aa12.31□□□□□ -0.44
LTBR-203ENST00000441074 BORAQ6PGQ7 559 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms