RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 BSPRYQ5W0U4 402 aa24.78■■□□□ 1.56
VARS-217ENST00000440048 NKD2Q969F2 451 aaPredicted RBP24.78■■□□□ 1.56
VARS-217ENST00000440048 LSM14BQ9BX40 385 aaKnown RBP24.78■■□□□ 1.56
VARS-217ENST00000440048 MARCH2Q9P0N8 246 aa24.78■■□□□ 1.56
VARS-217ENST00000440048 EP300Q09472 2414 aaPredicted RBP24.77■■□□□ 1.56
VARS-217ENST00000440048 STC2O76061 302 aa24.77■■□□□ 1.56
VARS-217ENST00000440048 PNMA6AP0CW24 399 aaPredicted RBP24.77■■□□□ 1.56
VARS-217ENST00000440048 ADH5P11766 374 aa24.77■■□□□ 1.56
VARS-217ENST00000440048 RPL34P49207 117 aaKnown RBP24.77■■□□□ 1.56
VARS-217ENST00000440048 CCR3P51677 355 aa24.77■■□□□ 1.56
VARS-217ENST00000440048 NCAPHQ15003 741 aa24.77■■□□□ 1.56
VARS-217ENST00000440048 ZNF528Q3MIS6 628 aa24.77■■□□□ 1.56
VARS-217ENST00000440048 ZC3H14Q6PJT7 736 aaKnown RBP24.77■■□□□ 1.56
VARS-217ENST00000440048 TSSK4Q6SA08 328 aa24.77■■□□□ 1.56
VARS-217ENST00000440048 IRGQQ8WZA9 623 aa24.77■■□□□ 1.56
VARS-217ENST00000440048 EZH1Q92800 747 aaPredicted RBP24.77■■□□□ 1.56
VARS-217ENST00000440048 FHOD1Q9Y613 1164 aa24.77■■□□□ 1.56
VARS-217ENST00000440048 ZNF292O60281 2723 aa24.76■■□□□ 1.55
VARS-217ENST00000440048 TPM2P07951 284 aa24.76■■□□□ 1.55
VARS-217ENST00000440048 HMBSP08397 361 aa24.76■■□□□ 1.55
VARS-217ENST00000440048 COG7P83436 770 aa24.76■■□□□ 1.55
VARS-217ENST00000440048 SATB1Q01826 763 aa24.76■■□□□ 1.55
VARS-217ENST00000440048 ANO6Q4KMQ2 910 aa24.76■■□□□ 1.55
VARS-217ENST00000440048 Q6ZNB5 142 aa24.76■■□□□ 1.55
VARS-217ENST00000440048 TMEM25Q86YD3 366 aa24.76■■□□□ 1.55
VARS-217ENST00000440048 CLEC4CQ8WTT0 213 aa24.76■■□□□ 1.55
VARS-217ENST00000440048 EDEM1Q92611 657 aa24.76■■□□□ 1.55
VARS-217ENST00000440048 SPHK2Q9NRA0 654 aa24.76■■□□□ 1.55
VARS-217ENST00000440048 ST7Q9NRC1 585 aa24.76■■□□□ 1.55
VARS-217ENST00000440048 OLA1Q9NTK5 396 aaKnown RBP24.76■■□□□ 1.55
VARS-217ENST00000440048 LIMA1Q9UHB6 759 aaKnown RBP24.76■■□□□ 1.55
VARS-217ENST00000440048 STRIP2Q9ULQ0 834 aa24.76■■□□□ 1.55
VARS-217ENST00000440048 GVINP1Q7Z2Y8 2422 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 SLC12A8A0AV02 714 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 FBXO21O94952 628 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 ZNF18P17022 549 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 CLCN1P35523 988 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 CXCL12P48061 93 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 SLC6A11P48066 632 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 COPB1P53618 953 aaKnown RBP24.75■■□□□ 1.55
VARS-217ENST00000440048 GAD2Q05329 585 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 PTK2Q05397 1052 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 RAPGEF1Q13905 1077 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 DRAP1Q14919 205 aaPredicted RBP24.75■■□□□ 1.55
VARS-217ENST00000440048 PKN3Q6P5Z2 889 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 C12orf40Q86WS4 652 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 FAM71AQ8IYT1 594 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 AOPEPQ8N6M6 819 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 STK32AQ8WU08 396 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 RNF139Q8WU17 664 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 NAA15Q9BXJ9 866 aaKnown RBP24.75■■□□□ 1.55
VARS-217ENST00000440048 MIS12Q9H081 205 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 HSD3B7Q9H2F3 369 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 ABCC13Q9NSE7 274 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 C2orf42Q9NWW7 574 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 CYTH4Q9UIA0 394 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 R4GN57 208 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 KIAA1549LQ6ZVL6 1849 aa24.75■■□□□ 1.55
VARS-217ENST00000440048 SPTBN4Q9H254 2564 aa24.74■■□□□ 1.55
VARS-217ENST00000440048 PRR23AA6NEV1 266 aa24.74■■□□□ 1.55
VARS-217ENST00000440048 HOXC11O43248 304 aaPredicted RBP24.74■■□□□ 1.55
VARS-217ENST00000440048 RNF40O75150 1001 aa24.74■■□□□ 1.55
VARS-217ENST00000440048 KLKB1P03952 638 aa24.74■■□□□ 1.55
VARS-217ENST00000440048 TDGF1P13385 188 aa24.74■■□□□ 1.55
VARS-217ENST00000440048 UCHL3P15374 230 aa24.74■■□□□ 1.55
VARS-217ENST00000440048 ACADSBP45954 432 aa24.74■■□□□ 1.55
VARS-217ENST00000440048 KLHL40Q2TBA0 621 aa24.74■■□□□ 1.55
VARS-217ENST00000440048 FBXO43Q4G163 708 aa24.74■■□□□ 1.55
VARS-217ENST00000440048 SLC47A2Q86VL8 602 aa24.74■■□□□ 1.55
VARS-217ENST00000440048 ANKRD20A12PQ8NF67 263 aa24.74■■□□□ 1.55
VARS-217ENST00000440048 SLC4A5Q9BY07 1137 aa24.74■■□□□ 1.55
VARS-217ENST00000440048 NAT10Q9H0A0 1025 aaKnown RBP24.74■■□□□ 1.55
VARS-217ENST00000440048 PLCB1Q9NQ66 1216 aa24.74■■□□□ 1.55
VARS-217ENST00000440048 EIF2DP41214 584 aaKnown RBP24.73■■□□□ 1.55
VARS-217ENST00000440048 KLK7P49862 253 aa24.73■■□□□ 1.55
VARS-217ENST00000440048 ANO4Q32M45 955 aa24.73■■□□□ 1.55
VARS-217ENST00000440048 FKBP15Q5T1M5 1219 aa24.73■■□□□ 1.55
VARS-217ENST00000440048 FMNL3Q8IVF7 1028 aa24.73■■□□□ 1.55
VARS-217ENST00000440048 SCUBE3Q8IX30 993 aa24.73■■□□□ 1.55
VARS-217ENST00000440048 NELL1Q92832 810 aa24.73■■□□□ 1.55
VARS-217ENST00000440048 PNKPQ96T60 521 aa24.73■■□□□ 1.55
VARS-217ENST00000440048 DCLK3Q9C098 648 aa24.73■■□□□ 1.55
VARS-217ENST00000440048 SFMBT1Q9UHJ3 866 aa24.73■■□□□ 1.55
VARS-217ENST00000440048 PCDHGC3Q9UN70 934 aa24.73■■□□□ 1.55
VARS-217ENST00000440048 CFAP54Q96N23 3096 aa24.73■■□□□ 1.55
VARS-217ENST00000440048 PAPSS2O95340 614 aaPredicted RBP24.72■■□□□ 1.55
VARS-217ENST00000440048 LTFP02788 710 aa24.72■■□□□ 1.55
VARS-217ENST00000440048 CDK11BP21127 795 aaKnown RBP24.72■■□□□ 1.55
VARS-217ENST00000440048 CORO1AP31146 461 aaKnown RBP24.72■■□□□ 1.55
VARS-217ENST00000440048 MESP2Q0VG99 397 aa24.72■■□□□ 1.55
VARS-217ENST00000440048 PPP2R5DQ14738 602 aa24.72■■□□□ 1.55
VARS-217ENST00000440048 TMEM110Q86TL2 294 aa24.72■■□□□ 1.55
VARS-217ENST00000440048 PASD1Q8IV76 773 aa24.72■■□□□ 1.55
VARS-217ENST00000440048 ETFBKMTQ8IXQ9 262 aa24.72■■□□□ 1.55
VARS-217ENST00000440048 WDTC1Q8N5D0 677 aa24.72■■□□□ 1.55
VARS-217ENST00000440048 BPIFA3Q9BQP9 254 aa24.72■■□□□ 1.55
VARS-217ENST00000440048 GANQ9H2C0 597 aa24.72■■□□□ 1.55
VARS-217ENST00000440048 ZNF510Q9Y2H8 683 aa24.72■■□□□ 1.55
VARS-217ENST00000440048 LRRC10BA6NIK2 292 aa24.71■■□□□ 1.55
VARS-217ENST00000440048 LGALS16A8MUM7 142 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms