RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 BRCA2P51587 3418 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 SLC15A5A6NIM6 579 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 CHADO15335 359 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 SLC8A3P57103 927 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 SLC18A2Q05940 514 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 RCN1Q15293 331 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 CCDC6Q16204 474 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 HSF5Q4G112 596 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 C16orf46Q6P387 395 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 CCDC62Q6P9F0 684 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 PYROXD2Q8N2H3 581 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 PTCD3Q96EY7 689 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 OXNAD1Q96HP4 312 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 CLPTM1LQ96KA5 538 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 MMP19Q99542 508 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 DPEP3Q9H4B8 488 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 PPARGC1AQ9UBK2 798 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 RGS17Q9UGC6 210 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 NME7Q9Y5B8 376 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 H3BRJ5 948 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 PAPSS1O43252 624 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 GAS2O43903 313 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 KRT37O76014 449 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 SNRPAP09012 282 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 P4HA1P13674 534 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 LCP1P13796 627 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 BAG6P46379 1132 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 HDAC4P56524 1084 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 TTLL12Q14166 644 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 ACSBG2Q5FVE4 666 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 FAM47CQ5HY64 1035 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 KHSRPQ92945 711 aaKnown RBP eCLIP14.05□□□□□ -0.162e-11■■□□□ 13.5
HERPUD1-204ENST00000439977 SKA1Q96BD8 255 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 APOL6Q9BWW8 343 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 KLC2Q9H0B6 622 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 GBA2Q9HCG7 927 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 SAR1AQ9NR31 198 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 CNTN3Q9P232 1028 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 TNS1Q9HBL0 1735 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 RFPL1O75677 317 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 WFS1O76024 890 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 CYP2F1P24903 491 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 ADORA2AP29274 412 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 ADORA2BP29275 332 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 NBPF20Q3BBV1 942 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 NOL9Q5SY16 702 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 LCLAT1Q6UWP7 414 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 OLFML1Q6UWY5 402 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 OR6B3Q8NGW1 331 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 TMPRSS4Q9NRS4 437 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 DONSONQ9NYP3 566 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 ERAP1Q9NZ08 941 aa14.05□□□□□ -0.16
HERPUD1-204ENST00000439977 HMX2A2RU54 273 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 TRAFD1O14545 582 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 DDNO94850 711 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 PEX19P40855 299 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 ALDH18A1P54886 795 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 KIZQ2M2Z5 673 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 DENND5BQ6ZUT9 1274 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 TREML1Q86YW5 311 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 NUDCD3Q8IVD9 361 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 C18orf25Q96B23 403 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 LNPEPQ9UIQ6 1025 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 MTO1Q9Y2Z2 717 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 PLLPQ9Y342 182 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 EVPLQ92817 2033 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 B2RBV5 119 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 AQP5P55064 265 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 RBP5P82980 135 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 ACAP1Q15027 740 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 KCNT2Q6UVM3 1135 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 AFG1LQ8WV93 481 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 E2F7Q96AV8 911 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 RILPQ96NA2 401 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 ZMAT2Q96NC0 199 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 MAGED2Q9UNF1 606 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 I3L4J1 428 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 NPTXRO95502 500 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 APOEP02649 317 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 MCF2P10911 925 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 CCDC130P13994 396 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 AMPD1P23109 780 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 MUM1Q2TAK8 710 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 BOLA3Q53S33 107 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 CES3Q6UWW8 571 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 LGMNQ99538 433 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 EBF4Q9BQW3 602 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 OSBPL1AQ9BXW6 950 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 NRDE2Q9H7Z3 1164 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 CYP3A43Q9HB55 503 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 SNTG2Q9NY99 539 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 TUBGCP4Q9UGJ1 667 aa14.04□□□□□ -0.16
HERPUD1-204ENST00000439977 CAPN9O14815 690 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 LYPLA1O75608 230 aaPredicted RBP14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 LGALS2P05162 132 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 CYP2C8P10632 490 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 SESN2P58004 480 aaPredicted RBP14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 OLIG2Q13516 323 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms