RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 TERB1Q8NA31 727 aa19.76■□□□□ 0.75
CCDC78-204ENST00000439619 DDX1Q92499 740 aaKnown RBP19.76■□□□□ 0.75
CCDC78-204ENST00000439619 SPACA7Q96KW9 195 aa19.76■□□□□ 0.75
CCDC78-204ENST00000439619 NT5C1BQ96P26 610 aa19.76■□□□□ 0.75
CCDC78-204ENST00000439619 LRRC4Q9HBW1 653 aa19.76■□□□□ 0.75
CCDC78-204ENST00000439619 VPS45Q9NRW7 570 aa19.76■□□□□ 0.75
CCDC78-204ENST00000439619 DNAJC17Q9NVM6 304 aaKnown RBP19.76■□□□□ 0.75
CCDC78-204ENST00000439619 RASAL2Q9UJF2 1139 aa19.76■□□□□ 0.75
CCDC78-204ENST00000439619 SLC30A4O14863 429 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 VDRP11473 427 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 TYRP14679 529 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 CHKAP35790 457 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 MPLP40238 635 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 KIR2DL1P43626 348 aaPredicted RBP19.75■□□□□ 0.75
CCDC78-204ENST00000439619 FMO5P49326 533 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 TKTL1P51854 596 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 BST2Q10589 180 aaKnown RBP19.75■□□□□ 0.75
CCDC78-204ENST00000439619 LRMPQ12912 555 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 GOLGA7BQ2TAP0 167 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 SCD5Q86SK9 330 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 PGBD3Q8N328 593 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 NELFBQ8WX92 580 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 IPO9Q96P70 1041 aaKnown RBP19.75■□□□□ 0.75
CCDC78-204ENST00000439619 TPSD1Q9BZJ3 242 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 MARK1Q9P0L2 795 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 NUDT5Q9UKK9 219 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 TSPAN16Q9UKR8 245 aa19.75■□□□□ 0.75
CCDC78-204ENST00000439619 CIZ1Q9ULV3 898 aaPredicted RBP19.75■□□□□ 0.75
CCDC78-204ENST00000439619 SGK1O00141 431 aa19.74■□□□□ 0.75
CCDC78-204ENST00000439619 XPO1O14980 1071 aaKnown RBP19.74■□□□□ 0.75
CCDC78-204ENST00000439619 MDM4O15151 490 aa19.74■□□□□ 0.75
CCDC78-204ENST00000439619 PMM2O15305 246 aa19.74■□□□□ 0.75
CCDC78-204ENST00000439619 P4HA2O15460 535 aa19.74■□□□□ 0.75
CCDC78-204ENST00000439619 CACNG3O60359 315 aa19.74■□□□□ 0.75
CCDC78-204ENST00000439619 FGFR1OPO95684 399 aaKnown RBP19.74■□□□□ 0.75
CCDC78-204ENST00000439619 ZBED1O96006 694 aa19.74■□□□□ 0.75
CCDC78-204ENST00000439619 YWHAGP61981 247 aaKnown RBP eCLIP19.74■□□□□ 0.75
CCDC78-204ENST00000439619 CREB5Q02930 508 aa19.74■□□□□ 0.75
CCDC78-204ENST00000439619 EFEMP1Q12805 493 aa19.74■□□□□ 0.75
CCDC78-204ENST00000439619 IL31Q6EBC2 164 aa19.74■□□□□ 0.75
CCDC78-204ENST00000439619 SIX6OS1Q8N1H7 587 aa19.74■□□□□ 0.75
CCDC78-204ENST00000439619 MDGA1Q8NFP4 955 aa19.74■□□□□ 0.75
CCDC78-204ENST00000439619 WBP2Q969T9 261 aa19.74■□□□□ 0.75
CCDC78-204ENST00000439619 DUSP15Q9H1R2 295 aaPredicted RBP19.74■□□□□ 0.75
CCDC78-204ENST00000439619 OLA1Q9NTK5 396 aaKnown RBP19.74■□□□□ 0.75
CCDC78-204ENST00000439619 DCLK1O15075 740 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 MAP3K13O43283 966 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 GREM1O60565 184 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 STC2O76061 302 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 CYBBP04839 570 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 PAEPP09466 180 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 SETSIPP0DME0 302 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 DGKGP49619 791 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 E2F5Q15329 346 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 RAB41Q5JT25 222 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 EMC10Q5UCC4 262 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 PPM1KQ8N3J5 372 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 PHTF2Q8N3S3 785 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 RNF139Q8WU17 664 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 MARCH2Q9P0N8 246 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 STARD13Q9Y3M8 1113 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 DMXL1Q9Y485 3027 aa19.73■□□□□ 0.75
CCDC78-204ENST00000439619 TCRBV21S2A2A0A5A6 115 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 DCDC2BA2VCK2 349 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 CD44P16070 742 aaKnown RBP19.72■□□□□ 0.75
CCDC78-204ENST00000439619 NTSR1P30989 418 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 PDE4CQ08493 712 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 MESP2Q0VG99 397 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 PAK1Q13153 545 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 MORC3Q14149 939 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 STILQ15468 1287 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 CCDC6Q16204 474 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 TTI2Q6NXR4 508 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 TMEM270Q6UE05 265 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 TMEM92Q6UXU6 159 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 Q6ZNB5 142 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 SFTPA1Q8IWL2 248 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 CHPFQ8IZ52 775 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 HMGB4Q8WW32 186 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 CTNND2Q9UQB3 1225 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 INVSQ9Y283 1065 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 PCDHB4Q9Y5E5 795 aa19.72■□□□□ 0.75
CCDC78-204ENST00000439619 MED19A0JLT2 244 aaPredicted RBP19.71■□□□□ 0.75
CCDC78-204ENST00000439619 PPP1R3GB7ZBB8 358 aa19.71■□□□□ 0.75
CCDC78-204ENST00000439619 BIN1O00499 593 aa19.71■□□□□ 0.75
CCDC78-204ENST00000439619 CAVIN2O95810 425 aa19.71■□□□□ 0.75
CCDC78-204ENST00000439619 HMBSP08397 361 aa19.71■□□□□ 0.75
CCDC78-204ENST00000439619 HOXB2P14652 356 aa19.71■□□□□ 0.75
CCDC78-204ENST00000439619 CORO1AP31146 461 aaKnown RBP19.71■□□□□ 0.75
CCDC78-204ENST00000439619 HARS2P49590 506 aaKnown RBP19.71■□□□□ 0.75
CCDC78-204ENST00000439619 LIMK1P53667 647 aa19.71■□□□□ 0.75
CCDC78-204ENST00000439619 SF3A2Q15428 464 aaKnown RBP19.71■□□□□ 0.75
CCDC78-204ENST00000439619 PLA2G2CQ5R387 149 aa19.71■□□□□ 0.75
CCDC78-204ENST00000439619 PMS2CLQ68D20 193 aa19.71■□□□□ 0.75
CCDC78-204ENST00000439619 PM20D1Q6GTS8 502 aa19.71■□□□□ 0.75
CCDC78-204ENST00000439619 LPCAT2Q7L5N7 544 aa19.71■□□□□ 0.75
CCDC78-204ENST00000439619 TRIML1Q8N9V2 468 aa19.71■□□□□ 0.75
CCDC78-204ENST00000439619 GOLGA1Q92805 767 aa19.71■□□□□ 0.75
CCDC78-204ENST00000439619 PLD4Q96BZ4 506 aa19.71■□□□□ 0.75
CCDC78-204ENST00000439619 ULBP1Q9BZM6 244 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms