RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 CHST8Q9H2A9 424 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 WDR26Q9H7D7 661 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 TRIM36Q9NQ86 728 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 ASIC5Q9NY37 505 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 DRG1Q9Y295 367 aaKnown RBP3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 TBC1D30Q9Y2I9 924 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 BIVM-ERCC5R4GMW8 1640 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 GOLGA3Q08378 1498 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 NWD1Q149M9 1564 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 CYP2D7A0A087X1C5 515 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 F8W8V4 182 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 SMIM22K7EJ46 135 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 AP4M1O00189 453 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 CHRM5P08912 532 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 TXNP10599 105 aaKnown RBP3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 IL1R1P14778 569 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 BTF3P20290 206 aaKnown RBP3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 SFPQP23246 707 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 EPHA3P29320 983 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 EPHB2P29323 1055 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 PRKAR1BP31321 381 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 PRIM2P49643 509 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 ZNF81P51508 661 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 RPS16P62249 146 aaKnown RBP3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 PSG6Q00889 435 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 IFIT5Q13325 482 aaKnown RBP3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 ARHGEF7Q14155 803 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 MTX3Q5HYI7 312 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 ZNF626Q68DY1 528 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 SLC18B1Q6NT16 456 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 BCDIN3DQ7Z5W3 292 aaKnown RBP3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 KCTD20Q7Z5Y7 419 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 SRLQ86TD4 932 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 CCDC33Q8N5R6 958 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 SVIPQ8NHG7 77 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 DNAJB14Q8TBM8 379 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 SMG7Q92540 1137 aaKnown RBP3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 PHKBQ93100 1093 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 VN1R3Q9BXE9 311 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 STK31Q9BXU1 1019 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 PCGF6Q9BYE7 350 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 SLC29A3Q9BZD2 475 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 FNIP2Q9P278 1114 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 AMFRQ9UKV5 643 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 PHLPP1O60346 1717 aa3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 POLR1AO95602 1720 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P12-201ENST00000438745 POM121BA6NF01 834 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 H3BNC9 293 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 SPRY2O43597 315 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 RRP9O43818 475 aaKnown RBP3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 CYP2D6P10635 497 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 ATF7P17544 494 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 RPL17P18621 184 aaKnown RBP3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 FPR3P25089 353 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 MPGP29372 298 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 RENBPP51606 427 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 AK2P54819 239 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 BIRC2Q13490 618 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 TMEM63BQ5T3F8 832 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 KLHDC7AQ5VTJ3 777 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 MORN5Q5VZ52 161 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 YTHDF3Q7Z739 585 aaKnown RBP3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 KRT78Q8N1N4 520 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 AFAP1Q8N556 730 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 LINC01465Q8N7H1 131 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 ADAMTS18Q8TE60 1221 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 STRBPQ96SI9 672 aaKnown RBP3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 MYD88Q99836 296 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 ELAC2Q9BQ52 826 aaKnown RBP3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 CIPCQ9C0C6 399 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 FAM83DQ9H4H8 585 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 RNF7Q9UBF6 113 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 CCNL1Q9UK58 526 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 ITGB1BP2Q9UKP3 347 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 TRPC5Q9UL62 973 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 USP22Q9UPT9 525 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 DAAM1Q9Y4D1 1078 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 ZNF518AQ6AHZ1 1483 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 KDM5CP41229 1560 aa3.96□□□□□ -1.78
HMGB3P12-201ENST00000438745 FAM135AQ9P2D6 1515 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 DNMT1P26358 1616 aaKnown RBP3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 DIP2CQ9Y2E4 1556 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 MSH6P52701 1360 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 TMEM94Q12767 1356 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 BTBD19C9JJ37 291 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 H7C4K7 107 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 PSMD9O00233 223 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 TP73O15350 636 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 NCK2O43639 380 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 EXOC3O60645 756 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 MOSPD3O75425 235 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 RASSF9O75901 435 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 MT-CO3P00414 261 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 PARP1P09874 1014 aaKnown RBP3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 CYP2A6P11509 494 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 SERPINB3P29508 390 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 STT3AP46977 705 aa3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 PTDSS1P48651 473 aaKnown RBP3.95□□□□□ -1.78
HMGB3P12-201ENST00000438745 CPT1AP50416 773 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms