RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 HOXC11O43248 304 aaPredicted RBP25.91■■□□□ 1.74
RAPGEF1-206ENST00000438647 GFRA3O60609 400 aa25.91■■□□□ 1.74
RAPGEF1-206ENST00000438647 STC2O76061 302 aa25.91■■□□□ 1.74
RAPGEF1-206ENST00000438647 ACADSBP45954 432 aa25.91■■□□□ 1.74
RAPGEF1-206ENST00000438647 APBA1Q02410 837 aa25.91■■□□□ 1.74
RAPGEF1-206ENST00000438647 PREPLQ4J6C6 727 aaPredicted RBP25.91■■□□□ 1.74
RAPGEF1-206ENST00000438647 CDKAL1Q5VV42 579 aa25.91■■□□□ 1.74
RAPGEF1-206ENST00000438647 BSPRYQ5W0U4 402 aa25.91■■□□□ 1.74
RAPGEF1-206ENST00000438647 BHLHA9Q7RTU4 235 aa25.91■■□□□ 1.74
RAPGEF1-206ENST00000438647 GOLGA1Q92805 767 aa25.91■■□□□ 1.74
RAPGEF1-206ENST00000438647 PNKPQ96T60 521 aa25.91■■□□□ 1.74
RAPGEF1-206ENST00000438647 SIX2Q9NPC8 291 aa25.91■■□□□ 1.74
RAPGEF1-206ENST00000438647 YJEFN3A6XGL0 299 aa25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 BECN2A8MW95 431 aa25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 CHURC1-FNTBB4DL54 471 aa25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 E7ENQ6 273 aa25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 SART1O43290 800 aaKnown RBP25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 TDGF1P13385 188 aa25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 GPD2P43304 727 aa25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 MYL5Q02045 173 aa25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 PTK2Q05397 1052 aa25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 ANO4Q32M45 955 aa25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 C11orf57Q6ZUT1 292 aaPredicted RBP25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 ZBTB44Q8NCP5 570 aa25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 ANKRD20A12PQ8NF67 263 aa25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 STK32AQ8WU08 396 aa25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 NDRG1Q92597 394 aaKnown RBP25.9■■□□□ 1.74
RAPGEF1-206ENST00000438647 PRR23AA6NEV1 266 aa25.89■■□□□ 1.74
RAPGEF1-206ENST00000438647 Q6ZNB5 142 aa25.89■■□□□ 1.74
RAPGEF1-206ENST00000438647 ACDQ96AP0 544 aa25.89■■□□□ 1.74
RAPGEF1-206ENST00000438647 PLD4Q96BZ4 506 aa25.89■■□□□ 1.74
RAPGEF1-206ENST00000438647 ST7Q9NRC1 585 aa25.89■■□□□ 1.74
RAPGEF1-206ENST00000438647 TAB2Q9NYJ8 693 aa25.89■■□□□ 1.74
RAPGEF1-206ENST00000438647 TMEM63CQ9P1W3 806 aa25.89■■□□□ 1.74
RAPGEF1-206ENST00000438647 WDR35Q9P2L0 1181 aa25.89■■□□□ 1.74
RAPGEF1-206ENST00000438647 SLC12A8A0AV02 714 aa25.88■■□□□ 1.73
RAPGEF1-206ENST00000438647 LMNAP02545 664 aaKnown RBP25.88■■□□□ 1.73
RAPGEF1-206ENST00000438647 APODP05090 189 aa25.88■■□□□ 1.73
RAPGEF1-206ENST00000438647 CHKAP35790 457 aa25.88■■□□□ 1.73
RAPGEF1-206ENST00000438647 RPL34P49207 117 aaKnown RBP25.88■■□□□ 1.73
RAPGEF1-206ENST00000438647 DENND1BQ6P3S1 775 aa25.88■■□□□ 1.73
RAPGEF1-206ENST00000438647 NUDT18Q6ZVK8 323 aa25.88■■□□□ 1.73
RAPGEF1-206ENST00000438647 TMEM25Q86YD3 366 aa25.88■■□□□ 1.73
RAPGEF1-206ENST00000438647 NAT10Q9H0A0 1025 aaKnown RBP25.88■■□□□ 1.73
RAPGEF1-206ENST00000438647 FANCLQ9NW38 375 aa25.88■■□□□ 1.73
RAPGEF1-206ENST00000438647 MARK1Q9P0L2 795 aa25.88■■□□□ 1.73
RAPGEF1-206ENST00000438647 HBS1LQ9Y450 684 aaKnown RBP25.88■■□□□ 1.73
RAPGEF1-206ENST00000438647 FANCMQ8IYD8 2048 aa25.88■■□□□ 1.73
RAPGEF1-206ENST00000438647 ZFHX2Q9C0A1 2572 aaPredicted RBP25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 PIK3R2O00459 728 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 KAT7O95251 611 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 HMBSP08397 361 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 CORO1AP31146 461 aaKnown RBP25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 HOXA6P31267 233 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 GRIA2P42262 883 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 BPIFB4P59827 614 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 TYRO3Q06418 890 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 KCNMA1Q12791 1236 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 KRT31Q15323 416 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 FKBP15Q5T1M5 1219 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 KLHDC7AQ5VTJ3 777 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 ASCL5Q7RTU5 278 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 RPLP0P6Q8NHW5 317 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 EDEM1Q92611 657 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 EZH1Q92800 747 aaPredicted RBP25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 XPO6Q96QU8 1125 aaKnown RBP25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 TRIM62Q9BVG3 475 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 BBS2Q9BXC9 721 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 ACP6Q9NPH0 428 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 ARHGEF4Q9NR80 690 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 DEC1Q9P2X7 70 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 SLC8A2Q9UPR5 921 aa25.87■■□□□ 1.73
RAPGEF1-206ENST00000438647 K7ESF4 209 aa25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 GABBR2O75899 941 aa25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 LTFP02788 710 aa25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 SLC6A11P48066 632 aa25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 RAPGEF1Q13905 1077 aa25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 PKN3Q6P5Z2 889 aa25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 C12orf40Q86WS4 652 aa25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 FMNL3Q8IVF7 1028 aa25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 ETFBKMTQ8IXQ9 262 aa25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 LSM14BQ9BX40 385 aaKnown RBP25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 SLC4A5Q9BY07 1137 aa25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 MIS12Q9H081 205 aa25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 VPS16Q9H269 839 aa25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 AJAP1Q9UKB5 411 aaPredicted RBP25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 PCDHGC3Q9UN70 934 aa25.86■■□□□ 1.73
RAPGEF1-206ENST00000438647 MYOFQ9NZM1 2061 aa25.85■■□□□ 1.73
RAPGEF1-206ENST00000438647 NEDD8-MDP1E9PL57 170 aa25.85■■□□□ 1.73
RAPGEF1-206ENST00000438647 FOXN3O00409 490 aaPredicted RBP25.85■■□□□ 1.73
RAPGEF1-206ENST00000438647 LILRB5O75023 590 aa25.85■■□□□ 1.73
RAPGEF1-206ENST00000438647 HARS2P49590 506 aaKnown RBP25.85■■□□□ 1.73
RAPGEF1-206ENST00000438647 CAVIN1Q6NZI2 390 aaKnown RBP25.85■■□□□ 1.73
RAPGEF1-206ENST00000438647 MSANTD2Q6P1R3 559 aa25.85■■□□□ 1.73
RAPGEF1-206ENST00000438647 TPGS1Q6ZTW0 290 aa25.85■■□□□ 1.73
RAPGEF1-206ENST00000438647 SYT13Q7L8C5 426 aa25.85■■□□□ 1.73
RAPGEF1-206ENST00000438647 FAM71AQ8IYT1 594 aa25.85■■□□□ 1.73
RAPGEF1-206ENST00000438647 NAT16Q8N8M0 369 aa25.85■■□□□ 1.73
RAPGEF1-206ENST00000438647 NOX5Q96PH1 765 aa25.85■■□□□ 1.73
RAPGEF1-206ENST00000438647 PLCB1Q9NQ66 1216 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms