RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 SNIP1Q8TAD8 396 aaKnown RBP9.17□□□□□ -0.94
SCRN1-208ENST00000438497 MYCBPAPQ8TBZ2 947 aa9.17□□□□□ -0.94
SCRN1-208ENST00000438497 PRCCQ92733 491 aaPredicted RBP9.17□□□□□ -0.94
SCRN1-208ENST00000438497 WBP2Q969T9 261 aa9.17□□□□□ -0.94
SCRN1-208ENST00000438497 TMEM176AQ96HP8 235 aa9.17□□□□□ -0.94
SCRN1-208ENST00000438497 ZFRQ96KR1 1074 aaKnown RBP9.17□□□□□ -0.94
SCRN1-208ENST00000438497 FAM213AQ9BRX8 229 aa9.17□□□□□ -0.94
SCRN1-208ENST00000438497 BBS2Q9BXC9 721 aa9.17□□□□□ -0.94
SCRN1-208ENST00000438497 MKRN2Q9H000 416 aaKnown RBP9.17□□□□□ -0.94
SCRN1-208ENST00000438497 USP36Q9P275 1121 aaKnown RBP9.17□□□□□ -0.94
SCRN1-208ENST00000438497 ITGA11Q9UKX5 1188 aa9.17□□□□□ -0.94
SCRN1-208ENST00000438497 PCDHGA1Q9Y5H4 931 aa9.17□□□□□ -0.94
SCRN1-208ENST00000438497 MYH10P35580 1976 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 H0Y8X5 98 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 CACNG3O60359 315 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 SYNCRIPO60506 623 aaKnown RBP9.16□□□□□ -0.94
SCRN1-208ENST00000438497 RTN3O95197 1032 aaPredicted RBP9.16□□□□□ -0.94
SCRN1-208ENST00000438497 LDOC1O95751 146 aaPredicted RBP9.16□□□□□ -0.94
SCRN1-208ENST00000438497 LDHAP00338 332 aaKnown RBP9.16□□□□□ -0.94
SCRN1-208ENST00000438497 ADSSP30520 456 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 ACTN2P35609 894 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 GNL1P36915 607 aaPredicted RBP9.16□□□□□ -0.94
SCRN1-208ENST00000438497 CCT8P50990 548 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 ZNF131P52739 623 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 ZNF132P52740 706 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 WNT7BP56706 349 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 RHDQ02161 417 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 TLE3Q04726 772 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 KCNH2Q12809 1159 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 INAVAQ3KP66 663 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 MDH1BQ5I0G3 518 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 USP49Q70CQ1 688 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 HTR3DQ70Z44 454 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 FAM124AQ86V42 546 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 FMNL3Q8IVF7 1028 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 CXorf38Q8TB03 319 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 KBTBD7Q8WVZ9 684 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 SNX19Q92543 992 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 IGSF8Q969P0 613 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 FBXO32Q969P5 355 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 PCED1BQ96HM7 432 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 NACA2Q9H009 215 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 IKZF4Q9H2S9 585 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 CCSER2Q9H7U1 834 aa9.16□□□□□ -0.94
SCRN1-208ENST00000438497 COL6A6A6NMZ7 2263 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 ENC1O14682 589 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 NPC1O15118 1278 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 DFNA5O60443 496 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 TMEM191BP0C7N4 346 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 C6P13671 934 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 PTPN1P18031 435 aaKnown RBP9.15□□□□□ -0.94
SCRN1-208ENST00000438497 WARSP23381 471 aaKnown RBP9.15□□□□□ -0.94
SCRN1-208ENST00000438497 IL12RB1P42701 662 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 IL9RQ01113 521 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 DNAJC3Q13217 504 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 ORC1Q13415 861 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 LY6DQ14210 128 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 ZNF720Q7Z2F6 126 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 LIMS2Q7Z4I7 341 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 SPACA3Q8IXA5 215 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 ZSWIM2Q8NEG5 633 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 OVCA2Q8WZ82 227 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 HPDLQ96IR7 371 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 FAM84AQ96KN4 292 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 CNDP2Q96KP4 475 aaKnown RBP9.15□□□□□ -0.94
SCRN1-208ENST00000438497 FIZ1Q96SL8 496 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 MMS19Q96T76 1030 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 DUSP9Q99956 384 aaKnown RBP9.15□□□□□ -0.94
SCRN1-208ENST00000438497 SEMA4CQ9C0C4 833 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 PCED1AQ9H1Q7 454 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 SNX25Q9H3E2 840 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 C6orf106Q9H6K1 298 aaPredicted RBP9.15□□□□□ -0.94
SCRN1-208ENST00000438497 TM9SF3Q9HD45 589 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 OSGEPQ9NPF4 335 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.15□□□□□ -0.94
SCRN1-208ENST00000438497 SIX4Q9UIU6 781 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 SLCO1B1Q9Y6L6 691 aa9.15□□□□□ -0.94
SCRN1-208ENST00000438497 VWA3AA6NCI4 1184 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 CBX4O00257 560 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 SLC28A2O43868 658 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 BRINP1O60477 761 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 TBCAO75347 108 aaKnown RBP9.14□□□□□ -0.95
SCRN1-208ENST00000438497 RFPL3O75679 317 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 IGLV3-19P01714 112 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 ACO1P21399 889 aaKnown RBP9.14□□□□□ -0.95
SCRN1-208ENST00000438497 CTSKP43235 329 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 GRIA4P48058 902 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 CACNA2D1P54289 1103 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 SRSF1Q07955 248 aaKnown RBP eCLIP9.14□□□□□ -0.95
SCRN1-208ENST00000438497 MCM6Q14566 821 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 TMEM119Q4V9L6 283 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 PKDCCQ504Y2 493 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 PRAMEF14Q5SWL7 426 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 ARHGAP40Q5TG30 622 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 HES3Q5TGS1 186 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 BROXQ5VW32 411 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 SNX30Q5VWJ9 437 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 ADAT2Q7Z6V5 191 aaKnown RBP9.14□□□□□ -0.95
SCRN1-208ENST00000438497 GATAD2AQ86YP4 633 aa9.14□□□□□ -0.95
SCRN1-208ENST00000438497 BRSK2Q8IWQ3 736 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms